Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0743 ATGGCTGCAAGTTTTGCATATAAATGTTCTCGTGGGGCTAAGAAGGTTATGTGCATACAACCTCTGAAAGGGAGGAAAGGGGCAAGATTGGGTGACACTATAATTGCATCAGTGAAGGAAGCCCATCCTAATGGGAAAGTTAAAAAAGGAAAAGTCGTGTATGGTGTGGTTGTGCGTGCGGCGATGCAAAGGGGGCGATGTGATGGCAGTGAGGTCAAGTTTGATGATAATGCTGTGGTGCTTGTTGACAAGCAAGGGCAGCCGATTGGGACGAGAGTTTTCGGGCCAGTCCCACATGAGCTGAGGATGAAGAAACATTTCTCTGCTGGATTTGATATGTTTACAAAATTAGCGTCAAGGATAATGGCTGCAATAACATTGAACCCCAATATCACGAACTTATTGTGGAAACCAAAGTCGTCGGACTCGTCGTTCCTTCATAATCCTCAAAAGCTTAACTCTGTTCAAGGGAAATAG 477 0.4486 MAASFAYKCSRGAKKVMCIQPLKGRKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRMKKHFSAGFDMFTKLASRIMAAITLNPNITNLLWKPKSSDSSFLHNPQKLNSVQGK 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0743 158 Hamap 50S ribosomal protein L14 [rplN]. 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele48g0743 158 SMART Ribosomal_L14_2 12 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele48g0743 158 SUPERFAMILY Ribosomal protein L14 12 107 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele48g0743 158 Gene3D Ribosomal protein L14 9 122 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele48g0743 158 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 11 105 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele48g0743 158 TIGRFAM rplN_bact: ribosomal protein uL14 11 106 IPR005745 GO:0003735|GO:0006412|GO:0015934
Lele48g0743 158 ProSitePatterns Ribosomal protein L14 signature. 55 81 IPR019972 -
Lele48g0743 158 Pfam Ribosomal protein L14p/L23e 12 106 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0743 Lele-ChrLele48 12727588 12730338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0743 1 119 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 30.952 3.15e-07 45.1