Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0741 ATGGAATTATTGAAATGGGGACTTCATTTTCATTTTTTCCACTTCCTACTTAATGGACTTAACTTGAATTATATTCATCCCATCTTTAATCTTCTAGGACTTAACATTTGTTTTGTTGATGTTATCTTTGATTTCTTAGGTCTCAACAATTCCTTTTCTGCTAGTCAAGAAGACCAAGAGTGCTTGAGTTATTTTTCTCAGGTTTCCATGAGTGCAATTGGAAGATCCTCTGAATCAAATAAGAAAGCACCATTGAGAAAACATGGTATTGGAAAAGGTTTAATGACAGTATGGAGGGCTACAAATCCTGACGCTGGAGATGTTCCTATTGGCTTTGGTCTTGTTGATAAGCCACGGAAAATACTAACCACTGCTGTAAATTATCCTACCCATAAAGTTTATGTTCTGTTTTTGGGAAGACAAAAGCCTAAACTACAGAATGTGAGAAATAAAATACAAGAAAAGAGGAAGGCTTTCATGCAAAGAAGATCGGTGAAATATAACCAGGATGTGAGTCAGAATCAACCACAGAAGGAGAAATGTGAACTTGTTTTGGTTAGATTTATGCCTAAGGAGGATCTTCATCGAATGCCATTTTTAATTGATGATGAAGAGCTAGAGATGAGAGAGTTACAATCAGGGCCAGATCCGCATATGTTTTCTGATCATCTTGCGTCCAGCGGAATTCTTGGCTGCTCTCTTTGTAAAGATGTGCTGTCTAAGTTTCCCCCAGATACTGTTAAGATGAAGAAACCCATCTGTTTGCAACCTTGGGACTCCTCTTCAGAAACTGTCAAGAAACTTTTTAAGGTATTCCATTTTCTTTATACATATGCTACTGTTGTTAATATTTGCCCCTTCACTCTTGATGAGCTTGCTCAAGCGTTTCATGATAAGGACTCAATGTTACTTGGAAAGATTCATTTGGCCCTTCTTACGCTTCTTCTATCTGACATTGAAGTGGAACTTACTAGTGGATTTCAACCTCATTTAAATAAGTCATGCAATTTTCTTGCATTGCTTCACTCGGTTGAAAATCAAGAATATTCACTGGACTTGTGGAAAAGATCTCTTAATTCCCTTACATGGATAGAAATACTCCGACAACTTTTGGTTGCTGCTGGTTTTGGTTCAAAACAATGTTCTTTGCGAAGGGAAGCACTTAACAAGGAATTGAATCTCCTAGTAAAGTTTGGCTTATGTTCTGGCACTTTGAAGGGCGACTTGTTTAAGATTTTGTTAGCACAAGGAAATAATGGGTCAAAGGTATCTGAGCTGGCAAAGTCAATGCAGATTGTTGAATTGAACCTTGCCAGCACAACAGAGGAGCTGGAATCTTTAATATATTCAACCCTGTCTAGTGACATTACTTTATTCGAAAAGATCTCATCATCTGCATATCGATTGCGCACGAGCTCTTTTAAGAAGGATGTTGATGACATTCAATCAGATACAGAAGACTCTGGAAGTGTAGATGATGAACTTAATCACAGTAATACATGGAGCAGTGGTGATGATTTTGAACGTGATTCAGGGAACTCCTACTTGAGGAACTTGAAGCGTGGAAGTAACTCTATAATGAAAAAGAATATGCTTAAAGCATCCACTGAAATTGATGAGAGTCATCTGGGAGAAGTGTGGCTATTAGGATTCATGGAGAGTGAATATTCAGATTTGAGCATTGAGGAAAAGTTGAATGCATTAGTGGCTCTAACTGATCTTCTTTCTTCTGGGTCCAGCATTAGGATGAAGGATCCGACAAAAGTTACTGCTGATTACAGTTTGAGCATCCAGTTACGTGGTTCTGGAGCAAAAATAAAGAGGTCAATAGTGCAGAAGCCTGGGTCATATGGGAATCAGATTGGACCCATGCATTATGTTAAAGAAGGGCGTTCATCATTGAATCCTCACTCCTATCCAGTGGATTCCTCATTATTATTCTCAAATATCTACAGTGACGAGGAATCCTTTGAGAAGGGGAATGAAGCAACTGAAATAGGTTTAACCAATTCACATCCCATCCAATCAATGTTTTTGGGATCTGACCGTAGGTACAATAGATACTGGCTTTTCTTAGGGCCTTGCATTGTGGGTGATCCTGGCCATAGGAGAGTTTACTTTGAATCTTCTGAAGATGGTCACTGGGCAGTGATTGATAATGAAGAGGCTTTATGTGCCTTGCTGACAGTTTTGGATGATAGAGGTAAACGGGAGGCACTTCTTGTTGAATCTTTGGAGAAGCTGAAAGCCACTCTTTGCGGAGCTATGTCCAGGAGAATGGTCAACCATTCTGGAATGTGTCATACGTCAAATTCTGACCAATCTGATCTTGATAGGATCACAGAGGACAGTTATTCTCCAATATCTGATGTAGATAACCTGAGCCTGATTGAGACAGCCAGCGACTCTCCTTCAGATGGGGCTGTGGTAATTGAAGCTGGAAAGAAGGGAGCGGAACAAATGCAAAAGTGGATCCGTCTTCAAGCATATGATTCATGGATTTGGAATTCCTTTTATTTAAATCTCAATGTTGTGAAATATGGTAGAAGGTCTTATATTGATTCTCTGGCTAGATGTGAGAGTTGTCACGATCTATTCTGGAGGGATGAGAGACACTGTAAAATTTGCCATTTGACATTTGAGCTTGATTTTGATCTTGAAGAAAGATATGCAATCCACACAGCCACATGCAGGGAGAAAGAAGACAGTAACACTTTTCCAAATCACAAAATCTTATCATCGAAGATCCAGTCACTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGTAGATGCGCTGGTGGGTGCTTGGAGGAAGTCTGCTCATAAATTATGGATCAGACGACTCAGACGAACTTCAACTTTAACGGACCTTTTTCAGGTTGTTGCTGATTTCGTTGGTGCTATCAATGAAGATTGGTTGTTTCAGTGCAGTTTTCCTGAAGGTGTGGTTGATAAAATCATTGCTTCTTTTGCACTTATGCCCCATACTTCATCAGCTCTTGCTCTATGGTTAGTGAAGTTGGATGCCATAATTGCTCCCTACCTGGACAAAGTCCAGCCTCCGAAGAAGCAGGACATTACTAAGAGGGAACGAAGTATTATTACTTTGGTGTTTAACCTTGTTGAAGAGAAGCCCTGCTTTCTCTTGAAAGATACAGGGGAAGTAGCACATGCTCACCACTACCTATTGGCGGATTTAGTTTTCCTTCCGTGA 3222 0.3973 MELLKWGLHFHFFHFLLNGLNLNYIHPIFNLLGLNICFVDVIFDFLGLNNSFSASQEDQECLSYFSQVSMSAIGRSSESNKKAPLRKHGIGKGLMTVWRATNPDAGDVPIGFGLVDKPRKILTTAVNYPTHKVYVLFLGRQKPKLQNVRNKIQEKRKAFMQRRSVKYNQDVSQNQPQKEKCELVLVRFMPKEDLHRMPFLIDDEELEMRELQSGPDPHMFSDHLASSGILGCSLCKDVLSKFPPDTVKMKKPICLQPWDSSSETVKKLFKVFHFLYTYATVVNICPFTLDELAQAFHDKDSMLLGKIHLALLTLLLSDIEVELTSGFQPHLNKSCNFLALLHSVENQEYSLDLWKRSLNSLTWIEILRQLLVAAGFGSKQCSLRREALNKELNLLVKFGLCSGTLKGDLFKILLAQGNNGSKVSELAKSMQIVELNLASTTEELESLIYSTLSSDITLFEKISSSAYRLRTSSFKKDVDDIQSDTEDSGSVDDELNHSNTWSSGDDFERDSGNSYLRNLKRGSNSIMKKNMLKASTEIDESHLGEVWLLGFMESEYSDLSIEEKLNALVALTDLLSSGSSIRMKDPTKVTADYSLSIQLRGSGAKIKRSIVQKPGSYGNQIGPMHYVKEGRSSLNPHSYPVDSSLLFSNIYSDEESFEKGNEATEIGLTNSHPIQSMFLGSDRRYNRYWLFLGPCIVGDPGHRRVYFESSEDGHWAVIDNEEALCALLTVLDDRGKREALLVESLEKLKATLCGAMSRRMVNHSGMCHTSNSDQSDLDRITEDSYSPISDVDNLSLIETASDSPSDGAVVIEAGKKGAEQMQKWIRLQAYDSWIWNSFYLNLNVVKYGRRSYIDSLARCESCHDLFWRDERHCKICHLTFELDFDLEERYAIHTATCREKEDSNTFPNHKILSSKIQSLKAAIYAIESVMPVDALVGAWRKSAHKLWIRRLRRTSTLTDLFQVVADFVGAINEDWLFQCSFPEGVVDKIIASFALMPHTSSALALWLVKLDAIIAPYLDKVQPPKKQDITKRERSIITLVFNLVEEKPCFLLKDTGEVAHAHHYLLADLVFLP 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0741 1073 SMART testlast3 262 321 IPR018501 -
Lele48g0741 1073 ProSiteProfiles DDT domain profile. 262 321 IPR018501 -
Lele48g0741 1073 Pfam DDT domain 263 318 IPR018501 -
Lele48g0741 1073 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 552 582 IPR028942 -
Lele48g0741 1073 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 675 748 IPR028941 -
Lele48g0741 1073 PANTHER HOMEOBOX PROTEIN SIX 153 1019 - -
Lele48g0741 1073 MobiDBLite consensus disorder prediction 480 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0741 Lele-ChrLele48 12694219 12703659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0741 159 1039 Homeobox Transcription Factor Family AT1G28420 25.166 1.06e-67 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele48g0741 WSD 3.3e-13 No_clan