Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0740 ATGGACTGGGTGGGTCTACCAGCAGGAGTTAAATTTGATCCAACCGACCAAGAACTCATTGAACACCTCGAAGCCAAAGTCGAATCCAAGCTCATGAAATCTCACCCTCTCATCGATGAGTTCATTCCCACCATTGATGGAGAGGACGGCATCTGCTACACCCATCCCGAGAAACTCCCAGGAGTCACGAGGGATGGGTTGAACAGGCACTTTTTTCACAGGCCATCGAAGGCTTATACGACAGGGACGAGGAAGAGAAGGAAAATCCAGAACGAGTGTGATCAGTTACAAGGAGATGGAGGAGGAGGAGAAACCAGATGGCACAAAACTGGAAAAACCAGACCAGTTCTTGTGAATGGCAAGCAAGAAGGTTGCAAGAAAATCCTCGTACTCTACACAAACTTTGGAAAAAACCGGAAGCCTGAGAAGACCAGTTGGGTTATGCATCAGTACCATTTGGGACAACATGAAGAAGAGACAGAAGGCGAGCTTGTCGTCTCCAAAATATTCTTCCAGACACAGCCCAGACAATGCAACAACAACAACAAAAACAACAATATTGTTAATACAAATAATAATAATATTAATAATAATAGTAATTGGTCGGAGAGAAGCGCGACGACCGGCGAAGCGAGCGGAGTTCAGCCGAATAGTAACAGTAGAAGGGAGAGTACAAGTGGGAGTTGTTCTTCTAAAGAAATAGTCACTACTAATAGAGATCATGACGTCTCTACCTCTGTTGCTGTTCCTCCGGCGACATTAACGTCAACGACCTTCCCTGCTTTGGATCTTCATCATTATCAACACCTCAAATCTGACCATTTCAGCTCCATCCCATTCAGAAAAAGCTTCGATGAGGAATCATCTATCACACACTATCAACAAGAAGCAGAATGGTTGAAGTATTCTTCATATTGGCCTGATTCTGATAATCCAGGTCGTCATCATCATGGTTAG 957 0.4431 MDWVGLPAGVKFDPTDQELIEHLEAKVESKLMKSHPLIDEFIPTIDGEDGICYTHPEKLPGVTRDGLNRHFFHRPSKAYTTGTRKRRKIQNECDQLQGDGGGGETRWHKTGKTRPVLVNGKQEGCKKILVLYTNFGKNRKPEKTSWVMHQYHLGQHEEETEGELVVSKIFFQTQPRQCNNNNKNNNIVNTNNNNINNNSNWSERSATTGEASGVQPNSNSRRESTSGSCSSKEIVTTNRDHDVSTSVAVPPATLTSTTFPALDLHHYQHLKSDHFSSIPFRKSFDEESSITHYQQEAEWLKYSSYWPDSDNPGRHHHG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0740 318 ProSiteProfiles NAC domain profile. 6 172 IPR003441 GO:0003677|GO:0006355
Lele48g0740 318 SUPERFAMILY NAC domain 2 172 IPR036093 GO:0003677|GO:0006355
Lele48g0740 318 Gene3D NAC domain 15 177 IPR036093 GO:0003677|GO:0006355
Lele48g0740 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 234 IPR044799 GO:0003700
Lele48g0740 318 FunFam NAC domain-containing protein 73 15 176 - -
Lele48g0740 318 Pfam No apical meristem (NAM) protein 7 153 IPR003441 GO:0003677|GO:0006355
Lele48g0740 318 MobiDBLite consensus disorder prediction 176 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0740 Lele-ChrLele48 12681405 12686944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0740 2 181 NAC Transcription Factor Family AT5G56620 78.378 3.34e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele48g0740 NAM 5.2e-24 No_clan