Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0738 ATGGTTTCAGTTTGTGAATTTGGCCTTCGGAATTTGGTTGTGGTTGGTTTTAGGGTTTTGATTTATCTGTGTGGGATGAAGATCGAGCAATTGGACGATGTTGATTCGGATAGCTGTCGGAGACAAGGGAATTACGAGAGGCAGATTGTGAGTGTTGATGCAAAGAGGGCGTTGGTTGGAGCAGGTGCCCGGATCTTGTTTTACCCTACACTTTTGTATAATGTGCTTCGAAACAAGATTGAAGCAGAGTTCCGATGGTGGGATGAAGTCGATGAGTTTCTATTATTGGGAGCTGTTCCGTTCCCCAAAGACGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTAAACGAACCTTATGAAACCTTGGTGCCTTCGTCATTATATCTTGCACATGGGATCGATCATTTGGTTATCCCTACAAGGGATTATCTCTTTGCCCCTTCATTTGTTGATATAAGTCAAGCTGTGAAATTCATACATCAGAACGCAACATGTGGCAAGACTACTTATGTTCACTGTAAAGCTGGTCGGGGCAGGAGTACAACAATTGTCCTTTGTTATTTGGTTGAATACAAGCATATGACACCTCTTGCTGCCCTGGAATATGTACGGTCAAGACGACCTAGAGTTCTATTAGCACCCTCACAATGGAAGGCTGTTCAGAATTATAGCAAGGACAGACCTTGTACTAGGCCACACTCGCCCCCAGGTGATGCAGTTCTTATAACCAAAGCTGATCTTGAGGGTTACCATAACACATTTGATGCTGGTATGGAGCTGGCCATTGTTCCCAAATGGCCAAAGACAAAGTCTAATCCCATGATATCGAAGCTATCTTGCCTGTTTGCCTCGTTAAGAGTTTCTGGTTGTAGCGTACCAGTGACCCGGCGGCTGCCTGTGTCTGAGGCACAGAGTAGCCTTGAAGGGGATATTGCTTTCATCAGCTCCAATAAAGTGACAGCAGACTTAGGATGCAAGTTAAAGAGATACAGGAAACTGCACAATGGGATCAGAACTCTAGCTGGAAGCCACCTGAAGCGGTATGGTGACATCTTGATGTGGATGGCTTGGCCCATATCAAGATCCCCAAGCAGCTCCTGCAATAGGCCTATACCGTTTGGTCGGGACTGCCAATGGAAACGTGGCGGCTGA 1164 0.4596 MVSVCEFGLRNLVVVGFRVLIYLCGMKIEQLDDVDSDSCRRQGNYERQIVSVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYLAHGIDHLVIPTRDYLFAPSFVDISQAVKFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPLAALEYVRSRRPRVLLAPSQWKAVQNYSKDRPCTRPHSPPGDAVLITKADLEGYHNTFDAGMELAIVPKWPKTKSNPMISKLSCLFASLRVSGCSVPVTRRLPVSEAQSSLEGDIAFISSNKVTADLGCKLKRYRKLHNGIRTLAGSHLKRYGDILMWMAWPISRSPSSSCNRPIPFGRDCQWKRGG 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0738 387 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 26 287 - -
Lele48g0738 387 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 154 222 IPR000387 GO:0016311|GO:0016791
Lele48g0738 387 ProSiteProfiles Dual specificity protein phosphatase domain profile. 86 233 IPR020422 GO:0006470|GO:0008138
Lele48g0738 387 CDD PTPMT1 86 229 IPR044596 GO:0004721
Lele48g0738 387 SMART dsp_5 89 230 IPR020422 GO:0006470|GO:0008138
Lele48g0738 387 Pfam Dual specificity phosphatase, catalytic domain 130 228 IPR000340 GO:0008138|GO:0016311
Lele48g0738 387 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 80 228 IPR029021 -
Lele48g0738 387 Gene3D Protein tyrosine phosphatase superfamily 86 231 IPR029021 -
Lele48g0738 387 FunFam Dual specificity phosphatase domain protein 86 233 - -
Lele48g0738 387 ProSitePatterns Tyrosine specific protein phosphatases active site. 175 185 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0738 Lele-ChrLele48 12672091 12675113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0738 29 290 Protein tyrosine phosphatase (PTP) family AT2G35680 52.159 1.47e-97 292