Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0737 ATGGAGAAGACCTTTGTTCTCTCTTTTCTCTTCCTTCTCTTTCATTTAGCTCCAGCAAATGCTCTTGATCTTGGTGTTGGTGTAGGCGTAGGTGTAGGAATCGGCATCGGCATTGGAAATGGCGGTGGAGGAGGCGGTGGTGGGGCTAATAGTCCGGAATCTTCAAAGATGAACGTAGCCTACAAAAGTCTGCAAGCATGGAAATCAGCTATAACTGATGACCCATTAAAGATTCTTGATACTTGGATAGGTTCTGACGTTTGTTCTTATAAAGGAGTATTTTGTTCCAGAGCATCATCATCAGATAGTTCTTTTGTTGCAGGAATAGATCTCAACCATGCAAATCTTCAAGGAACTCTTGTTAAAGACCTATCTTTACTCACTGATATGTCTCTTCTTCATCTTAACAGCAACAGATTCACTGGTTCAGTTCCTGAAACATTCAAAGATCTTTCATCTCTGGAAGAATTAGACCTCAGTAACAACCAGTTTTCAGGTGAATTCCCCACAGTAGTTCTGAAAATGCCAAGTCTCGTTTACTTGGATCTCAGATTCAACTCCTTCTCTGGAACCCTCCCAGGTCAACTTTTCAGTAAAACTCTCGACGCAATTCTTCTCAACAATAACCGATTCCAAGGCGAAATCCCTCAGAATCTGGCTTCTTCATCAGCTTCTGTGATAAACCTAGCTAACAACAAATTCACTGGAAACATCCCAATAACAAGTTTAAGTTTAGTGGGTAGTTATAATTCTAAGCTGAAGGAGATTCTGTTCTTGAATAACCAGTTAACAGGTTGTATTCCTCAAGGAATGGGATTATTCAGAGACGTGCAAGTTCTTGATGTAAGCTTTAATTCATTGGTGGGTCAATTGCCAGGAACGTTATCTTGTTTGGAAGATATTGAAGTCCTTAACTTGGCTCATAATCAGCTTTCTGGGGAATTATCAGATGTGATATGTTCGTTGAAGAGTCTAGTGAATTTAACTGTGGCTTATAATTTTTTTAGTGGGTTGAGTGAAGAGTGTTCGAAGCTTTTGGTTAGGAATGTGGGGTTTGATTTTTCTGATAATTGTATTCCTGGGAAGAACATGCAGAGACCTAAACCAGAATGTTCTGTGATCCCAGGTGGTAGCTTAAGTTGTCTCAGAATCCCCATACCAAAGCCTCTTGATTGTGCTTCATTGGCCGTAACTTCTCCTTGA 1203 0.4032 MEKTFVLSFLFLLFHLAPANALDLGVGVGVGVGIGIGIGNGGGGGGGGANSPESSKMNVAYKSLQAWKSAITDDPLKILDTWIGSDVCSYKGVFCSRASSSDSSFVAGIDLNHANLQGTLVKDLSLLTDMSLLHLNSNRFTGSVPETFKDLSSLEELDLSNNQFSGEFPTVVLKMPSLVYLDLRFNSFSGTLPGQLFSKTLDAILLNNNRFQGEIPQNLASSSASVINLANNKFTGNIPITSLSLVGSYNSKLKEILFLNNQLTGCIPQGMGLFRDVQVLDVSFNSLVGQLPGTLSCLEDIEVLNLAHNQLSGELSDVICSLKSLVNLTVAYNFFSGLSEECSKLLVRNVGFDFSDNCIPGKNMQRPKPECSVIPGGSLSCLRIPIPKPLDCASLAVTSP 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0737 400 Gene3D Ribonuclease Inhibitor 175 247 IPR032675 -
Lele48g0737 400 PRINTS Leucine-rich repeat signature 298 311 - -
Lele48g0737 400 PRINTS Leucine-rich repeat signature 154 167 - -
Lele48g0737 400 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 52 384 - -
Lele48g0737 400 Pfam Leucine rich repeat N-terminal domain 62 96 IPR013210 -
Lele48g0737 400 SUPERFAMILY L domain-like 65 359 - -
Lele48g0737 400 FunFam Leucine-rich repeat extensin-like protein 1 61 221 - -
Lele48g0737 400 SMART LRR_typ_2 175 199 IPR003591 -
Lele48g0737 400 SMART LRR_typ_2 298 322 IPR003591 -
Lele48g0737 400 SMART LRR_typ_2 127 150 IPR003591 -
Lele48g0737 400 SMART LRR_typ_2 151 174 IPR003591 -
Lele48g0737 400 Pfam Leucine rich repeat 132 187 IPR001611 GO:0005515
Lele48g0737 400 Gene3D Ribonuclease Inhibitor 248 375 IPR032675 -
Lele48g0737 400 Gene3D Ribonuclease Inhibitor 59 173 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0737 Lele-ChrLele48 12650868 12652070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0737 53 383 Leucine-rich Repeat extension Gene Families AT3G24480 51.183 1.04e-107 324