Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0734 ATGTTCTTTTCAATTCCAATTTCATCAAAATGCTACAACACACGGAAAGCACAAGAAGACAGAGCAAGCTCCGATTTTCAGAGCCACCGAAAGCACCGAACTAGCGAGAACTCAACCCTCCAGAAGAAGATGTCGTGGCAAACCTACGTCGATGAGCACCTCATGTGCGACATGGAAGGTAATCATCTCAGTTCTGCTGCTATCGTTGGTCAAGACGGCAGCGTTTGGGCTCAGAGCGCCACTTTCCCTCAGTTCAAGCCCGAGGAAATCACTGGTATCATGAATGACTTTGCTGAACCTGGATCACTTGCTCCAACTGGATTATATCTTGGAGGCACTAAATATATGGTGATTCAAGGTGAACCCGGAGCAGTCATCCGAGGGAAGAAGGGTCCTGGTGGGGTTACTGTCAAGAAGACCAGCCAAGCCCTAATCATTGGAATTTATGATGAACCAATGACTCCTGGTCAGTGCAACATGATAGTGGAAAGGCTTGGTGATTACCTCATTGATCAGGGTCTTTAA 525 0.4705 MFFSIPISSKCYNTRKAQEDRASSDFQSHRKHRTSENSTLQKKMSWQTYVDEHLMCDMEGNHLSSAAIVGQDGSVWAQSATFPQFKPEEITGIMNDFAEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTSQALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0734 174 PRINTS Profilin signature 107 121 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Profilin signature 46 55 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Profilin signature 64 73 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Profilin signature 83 103 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Profilin signature 156 173 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Profilin signature 143 156 IPR005455 GO:0003779
Lele48g0734 174 FunFam Profilin 44 174 - -
Lele48g0734 174 MobiDBLite consensus disorder prediction 16 40 - -
Lele48g0734 174 PANTHER PROFILIN 44 173 IPR005455 GO:0003779
Lele48g0734 174 SMART prof_2 44 174 IPR005455 GO:0003779
Lele48g0734 174 CDD PROF 45 173 IPR005455 GO:0003779
Lele48g0734 174 Pfam Profilin 44 173 IPR005455 GO:0003779
Lele48g0734 174 SUPERFAMILY Profilin (actin-binding protein) 45 173 IPR036140 -
Lele48g0734 174 Gene3D Dynein light chain 2a, cytoplasmic 42 174 - -
Lele48g0734 174 MobiDBLite consensus disorder prediction 16 38 - -
Lele48g0734 174 PRINTS Plant profilin signature 70 83 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Plant profilin signature 95 109 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Plant profilin signature 114 123 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Plant profilin signature 147 160 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Plant profilin signature 44 57 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Plant profilin signature 127 142 IPR005455 GO:0003779
Lele48g0734 174 PRINTS Plant profilin signature 160 173 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0734 Lele-ChrLele48 12612462 12617189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0734 44 174 Cytoskeleton Gene Families AT2G19760 78.626 1.42e-77 225