Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0721 ATGATGCTCGGCGAGTCTCATCACGCTAAACCAACGGTACACGTTCCTCCTTGGCCGCTTCACCTCGATGATTTGACCGCTGATATCTGTTCTCCTTACCCGTTAAGCGGTGTCTCCTTCGACTCCGATGGTAATGCCAGTACCAGCGATTACTCGCCACTTTATTTACAAGAGACTCTATCGTCGTTGCAGCGTTATCTCCCATCCAACGATGCCGACATCGACTCTGATTCTGATGTTTCGGGTCGTGACTCCGATGCTCCGGTCGATGCCTACACCTGCGATCATTTCCGTATGTACGAGTTCAAGGTGAGGAGGTGCGCGCGTGGTAGGTCTCATGACTGGACGGAATGCCCTTATGCTCATCCGGGCGAGAAGGCTCGCCGGAGAGATCCTAGGAAGTATCACTATTCAGGAACTGCATGCCCAGATTTTCGCAAAGGCAGCTGTAAGAAGGCGGAATCTTGTGAGTTCGCTCATGGAGTATTTGAGTGTTGGCTTCACCCGTCTCGTTATCGTACGCAGCCGTGTAAGGACGGTACGAGCTGCAGGAGAAGGGTTTGCTTTTTTGCTCACACGCTGGAGCAACTGAGGATTCTGTCTCAGCAGAGTCCAAGGAGTGGTAACTCTAACTCGGTAGATTCATACGACGGCTCTCCATTGAGGCAGGCGATGGCGATTGAGTCTTCTTGTGCTAAAGCTCTGCCGTTCATGTCTTCTCCGTCTTCGATTTCACCTCCGGCTAGTTCTCCGACGGAGTCTCCTCCTGTGTCTCCGATGGCGCAGTCTCTGAGCCGGTCTGTTTGTTCAAGCTCCATCAACGAGATGGTGGCTTCTCTGCGAAATTTGCAGCTAGGCAAGGCCAAGTCTTTGTCGTTATCCTCTTCTTGGAATGTTCCTATGGGATCTCGCTGTTTCGGGTCTCCGAGGGGATCCATACTAAGACCCGGATTCTGCAGCCTCCCAACCACACCTACACAAGCGCCAACTAGCGCCGGTGGGAGCTATTTTGATATTTGGGAGCAGAGTTGTGAGGAGGAGCCGGTGATGGAGCGGGTAGAGTCCGGAAGGACCATAAGGTCAAAGATGTTCGAGAAACTGAGCAAGGAGAACTCCCTGGATAGGTCGGATCCGGGTTAA 1140 0.5263 MMLGESHHAKPTVHVPPWPLHLDDLTADICSPYPLSGVSFDSDGNASTSDYSPLYLQETLSSLQRYLPSNDADIDSDSDVSGRDSDAPVDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKAESCEFAHGVFECWLHPSRYRTQPCKDGTSCRRRVCFFAHTLEQLRILSQQSPRSGNSNSVDSYDGSPLRQAMAIESSCAKALPFMSSPSSISPPASSPTESPPVSPMAQSLSRSVCSSSINEMVASLRNLQLGKAKSLSLSSSWNVPMGSRCFGSPRGSILRPGFCSLPTTPTQAPTSAGGSYFDIWEQSCEEEPVMERVESGRTIRSKMFEKLSKENSLDRSDPG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0721 379 MobiDBLite consensus disorder prediction 242 262 - -
Lele48g0721 379 Gene3D - 93 162 - -
Lele48g0721 379 SMART c3hfinal6 171 194 IPR000571 GO:0046872
Lele48g0721 379 SMART c3hfinal6 136 162 IPR000571 GO:0046872
Lele48g0721 379 FunFam Zinc finger CCCH domain-containing protein 66 94 162 - -
Lele48g0721 379 ProSiteProfiles Zinc finger C3H1-type profile. 137 163 IPR000571 GO:0046872
Lele48g0721 379 PANTHER UNKEMPT FAMILY MEMBER 59 376 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0721 Lele-ChrLele48 11820602 11821741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0721 92 259 C2H2 Transcription Factor Family AT5G12850 51.724 1.08e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele48g0721 None None None