Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0720 ATGTTAATTCCAAAGAGACTCTTCGCCTTCCTCGTGCTCTTTCTTGCTCTTACAATTTCAGCTCATGGACAGCAACAAAGAGGTTTCGTAAGCATTGATTGTGGTGGTCCAGAGAATTTTGAATATACGGATGGAACCATTAAGTATAACACAGATGGAGCTTATATTAACACAGGTGTCAATAGAAGTATTTCCTCTGAATATAACTACCCAAAAAATCCAACTCTGCCACAACCACTTTCAGATTTGAGAAGTTTTCCTGAGGGTAAGAGGAATTGTTACAACATAAAAACTCCAATAAGGAACAGTTTGCATTTGATAAGGGCTTCTTTCTTGTATGGAAACTACGATGGAGAAAACAAGCTTCCAGAATTTGATCTCTATGTGGATGTCAATTTCTGGTCCTCAGTTACATTCAGAAATGCTTCAGAGCAACTCATAATGGAAATCATCAGCTTGAAAGTATCAGAGGAGATTAACGTTTGTCTTGTGAACAAAGGATCGGGAATTCCTTTCATCTCAGCGTTGGAACTTAGACCAATTATTTATGGCCATATTTATCGTACTGAGTTCGGTTCATATGCTTCACTGTTACTCTTCAAAAGATGGGACATTGCGTCTCTCAATGGAAGTGGAAGATATGAAGATGATGTTTATGATAGAATTTGGTCTCCTTACAGTTCATCTTCGTGGGAAACTTTGGAAACCTCTTCAGCCATTAATGGTAGTAATAGTGGCTATAATGCACCATTTGAAGTCATTAGGACTGCTGCTAGACCTAAGAATGAGGGTGCTCCTTTGGAATTCTCTTGGAAATCCAATGATCCGAACTCGAAATTTTATGTGTATTTGTACTTTGCTGAAGTTGAGAAGCTTCAGAAAAAGGAACTGAGAAAATTCAATATATCCTGGAATGGATCTCCATTATTTGGACCCTTTGTCCCTAGTTACTTAAACGCAACCATTGTGTCGAATTTGAAATCCTTGGTGGGAAATGAACATCAAATCTCAATTTCTAGAACAGATGACTCAACCTTACCACCCATCCTCAATGCAGTTGAGATTTATGTGGTAAGACAGATAGATGCAAAACAAACATTTGAACAAGATGTTGAAGCAATGATGAATGTCAAAGGAACATATGGTGTTCAAAGAAACTGGGTTGGTGATCCTTGTGAGCCAAAGGACTACAGTTGGGATGGCTTGGAATGTAACTACAGTAATTCGCTTCCACCGCGAATCATATCACTGAATTTGAGCTCAAGCAGTTTGAGCGGGGGAATAGCTTCTGAAATTTCCAATCTCTTGTTACTGGAATCATTGGATTTATCAAACAATAGCTTAACTGGATCAATACCTCAGTTTCTAGAAGACTTCAAATCCCTTAAAGTTCTGAACTTGAAAGGAAATCATCTTTCGGGTTCTGTTCCTGATAACCTTCTAGAAAGATCAAGAGCTGGATTACTTACACTGAGCGTGGATGACCAAAATATTTGTGGCTTAAGTACTTGCAAGAAAAAGAAGAATATTGCTGTTCCCATAGCTGTTTCTATATTATCAGTTCTGGTTCTATTGATTGCATTTGCTCTTATATGGAAATTGAGAAAGAAAAAACCATCAGATAAGGAGATAGAAAAGGCCAATAAAGGTGGAAGAAGTACTATAGCATCAAAAAAATGGCAATATAGCTATGAGGAGATTTTGGAAATCACCAACAACTTCAAAATGGCAATTGGTAAAGGAGGATTCGGAATAGTGTACCGCGGTGAATTGAAAGATTGGAACCAAGTTGCAGTGAAAATGCTTTCTCCATCATCATCTCAAGGAACAAAGGAATTTCAAACTGAGGCTGAGCTGTTGATGACAGTTCATCACAGAAATTTGGTATCCTTCATTGGTTATTGTGATGATGATAACAAGATGGCACTCATTTATGAGTACATGGCCAATGGCAACCTGAAGAATTACCTCAGAGACAAAAACTCAAATAGCTTGACTTGGCAAAGAAGACTTGAGATAGCAATTGATTCAGCACAAGGATTGGAATATCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTGAAGACAGCCAACATTCTATTGAATGAAAACTTGGAAGCTAAGATAGCTGATTTTGGACTGTCCAAGGTGTTTAAGAATGATAACACTAATGTTAATGCAGAGTCTGAAGTCATGGGCACCACAGGCTACCTTGACCCAGAGTACTACAAGTTACGAAAGTTGAACGAGAAAAGTGATATTTATAGTTTTGGAGTAGTTATATTAGAACTAATAACAGGTCAACCAGCAGTGATAAAAGGTGAAGAATTGGTTCACATAACTGTGTGGGTTGCAAATGAACTTGAAGAAAGAGGAGATCTTAGCAGAATTGTAGATCCAAAACTTGCAGGCAAATTCAATGCAGCTTCTGTGGAAAAAGCTTTAGGAATAGCAATGGCATGTAGTGCATCACCCTCCATTCACAGACCTACCTTGAATTTTGTGGTACAAGAGCTTAAACAGTGTTTGGAAATGGAGTGTCCTTCTCACAGTGACAGATTCGAGATGTTACCAAGGCAGGTTTATAGTGAGATATATAGTTCGTCAGAGCCTTATTCGTATGATACTGATTCTATCACTTCTCCTTTTGCTAGATAG 2667 0.3821 MLIPKRLFAFLVLFLALTISAHGQQQRGFVSIDCGGPENFEYTDGTIKYNTDGAYINTGVNRSISSEYNYPKNPTLPQPLSDLRSFPEGKRNCYNIKTPIRNSLHLIRASFLYGNYDGENKLPEFDLYVDVNFWSSVTFRNASEQLIMEIISLKVSEEINVCLVNKGSGIPFISALELRPIIYGHIYRTEFGSYASLLLFKRWDIASLNGSGRYEDDVYDRIWSPYSSSSWETLETSSAINGSNSGYNAPFEVIRTAARPKNEGAPLEFSWKSNDPNSKFYVYLYFAEVEKLQKKELRKFNISWNGSPLFGPFVPSYLNATIVSNLKSLVGNEHQISISRTDDSTLPPILNAVEIYVVRQIDAKQTFEQDVEAMMNVKGTYGVQRNWVGDPCEPKDYSWDGLECNYSNSLPPRIISLNLSSSSLSGGIASEISNLLLLESLDLSNNSLTGSIPQFLEDFKSLKVLNLKGNHLSGSVPDNLLERSRAGLLTLSVDDQNICGLSTCKKKKNIAVPIAVSILSVLVLLIAFALIWKLRKKKPSDKEIEKANKGGRSTIASKKWQYSYEEILEITNNFKMAIGKGGFGIVYRGELKDWNQVAVKMLSPSSSQGTKEFQTEAELLMTVHHRNLVSFIGYCDDDNKMALIYEYMANGNLKNYLRDKNSNSLTWQRRLEIAIDSAQGLEYLHHGCKPPIIHRDVKTANILLNENLEAKIADFGLSKVFKNDNTNVNAESEVMGTTGYLDPEYYKLRKLNEKSDIYSFGVVILELITGQPAVIKGEELVHITVWVANELEERGDLSRIVDPKLAGKFNAASVEKALGIAMACSASPSIHRPTLNFVVQELKQCLEMECPSHSDRFEMLPRQVYSEIYSSSEPYSYDTDSITSPFAR 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0720 888 Pfam Leucine Rich Repeat 438 457 IPR001611 GO:0005515
Lele48g0720 888 Pfam Protein tyrosine and serine/threonine kinase 575 772 IPR001245 GO:0004672|GO:0006468
Lele48g0720 888 SMART serkin_6 572 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0720 888 Gene3D Phosphorylase Kinase; domain 1 545 647 - -
Lele48g0720 888 SUPERFAMILY L domain-like 385 501 - -
Lele48g0720 888 ProSitePatterns Protein kinases ATP-binding region signature. 578 600 IPR017441 GO:0005524
Lele48g0720 888 FunFam Leucine-rich repeat receptor-like kinase 369 499 - -
Lele48g0720 888 Pfam Malectin-like domain 32 357 IPR024788 -
Lele48g0720 888 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 648 854 - -
Lele48g0720 888 ProSiteProfiles Protein kinase domain profile. 572 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0720 888 CDD STKc_IRAK 578 844 - -
Lele48g0720 888 PANTHER OS07G0107800 PROTEIN-RELATED 30 846 - -
Lele48g0720 888 Gene3D Transferase(Phosphotransferase) domain 1 648 862 - -
Lele48g0720 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Lele48g0720 888 FunFam Leucine-rich repeat receptor-like protein kinase 550 647 - -
Lele48g0720 888 SUPERFAMILY Protein kinase-like (PK-like) 555 842 IPR011009 -
Lele48g0720 888 Gene3D Ribonuclease Inhibitor 368 486 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0720 Lele-ChrLele48 11800168 11804691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0720 9 849 Receptor kinase-like Gene Family AT4G29180 54.060 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele48g0720 Malectin_like 2.8e-102 CL0202