Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0708 ATGATGACACGGTACCATCCCAAAGAAGATTGGGATAGGATAGGCACAAGTCAGGACAAATATGCAGAAAATTTGAGGATTCTCATTGGCCCTTCATATTGGGAGGACTATTCTCGAGGGAAGGAAGGTTCAGCTAGGTGTAGAATTCATAAACTCCCAGAAAAATTTTGCCAAGGAGTTTATGAGTTTGGTATGGCTGTGTCTCGCATTGGTTTATGGCGTAAGGTTTACAAGCTTGATCCAGACTGTATAGTTGTGGTTTACCTAGGAAAAGCTGACAATGTGAGAACAAGACTCCCACAGTATGGCCGAACTGGAGCTCATTTGAGCAATAACTGCTTAAAATCTGATCCAGATGATAGTAATCCTGCTTGTACCCATAAAGGGAAGGGATTTTTTGAAGAAATATTTTCACAAGGCTATCCAATTGTTTATAGATGGGCTCCTGTAAGTACATATGCCACTATCCAATTTTCACAAGGGATTCTGCGCAATTTATAG 501 0.4072 MMTRYHPKEDWDRIGTSQDKYAENLRILIGPSYWEDYSRGKEGSARCRIHKLPEKFCQGVYEFGMAVSRIGLWRKVYKLDPDCIVVVYLGKADNVRTRLPQYGRTGAHLSNNCLKSDPDDSNPACTHKGKGFFEEIFSQGYPIVYRWAPVSTYATIQFSQGILRNL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0708 166 Pfam GIY-YIG domain-containing protein 26 152 - -
Lele48g0708 166 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 8 152 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0708 Lele-ChrLele48 11512387 11516153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0708 8 163 HRT Transcription Factor Family AT5G56780 42.675 3.41e-33 120