Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0707 ATGGTAGCGGGGGCTTTACCCTCAGTCATTCGCAGGTTGAAGAGGGAAGAATGTAAACGAACAAAGCATGACTCCAACTTCTCTGATTGGAAGATTCTCATTGGCCCTTCGGATTGGGAGGACTATTCTAGAGGGAAGGAAGGGTCAGCTAGGTACAGAATTCATAACCTCCCAGAAAAATTGAGTCCAGGAGTTTATGAGCTTGGTATTGCTGTGTCTCGCATTGGTTTAGGCCGTAAGGTTTACAAGCTGGATCCAGACCGTATAGTTGTGGTTTACCTTGGAAAAGCTGACATTGTGAGAACAAGACTCCAACAGTATGGCCGAACTGGAGCTCATTTGAGCAATAACGGCTTAACTTCTGATCCAGATGATAGTAATCCTGCTTGTACCTATAAAGGGAAGGGACTTTTTGAAGAAATATTTTCACATGGTTATCCGGTTGTTTATAGATGGGCTCCCATGCAAAACAAAGAAGATTCCAAGAAAACGGAAAGTCAGCTGCTCATTGTATTTGATTATGCATGGAACTTGAGCAATAATGGTACCCAACGCCCGGGAGATATTCTTCAGAAGATTAATAAAGTGGCATCAGGTCTTACAACATTTTGGAACATGGCCAAGCTGCTTCAACCTTTCACCCAAAGGCGAGTGGGTATCCGAATCAAATCAAGCAGCATGCCTTCCCCAGATGTCAAATTACAAGAAATTGACAGAGGCAGCCATAATTTCTTATCTCGAGTATTTAAATTTGGCAGATCAAATCCAAGGTTAGTTCAAGATGTCCCTGGTGTAATTCAGGACAATACTAAAAGACTCTGTGGAGTGGTCTTGGGTGATGGTTCTGTTTGTACAAGATCGCCAGCTGAAAAAAGAATGAGGTGCGTAGAACACAAAGGAATGAGAATAAATGGCTCCACTTCCAAAAGGACAATGAAGTCAGAGAACATTGACATAGAACTCAATGTGAGCGAAGGCTATGGTGAAGAACATGTCCCTAGTGTCATTCAGGACAATACTACAAGATTTTGTGGAGTGGTCTTGGGTGATGGTTCTTTTTGTATAAGACTACCTGTTGAAAGAAGAATGAGGTGTGTGGAACACAAAGGAATGAGAATAAATGGGTTCACTTCCAAAAAGACAATGAAATTAAAGAACAATCTGGACATAGAACTCAATGTGCCCTATCACTTGAAGAGCGAAGGCCATGGCAAAAAGCATGTTAGCCAAGATTTTAAAGACCCTTCCCATATTGCAGTTGAGAATCCTCTTGATGGTAGAATTACCAATATATGTGGAATAATTTGGAATGATGGTACTCCTTGCAGGAGTCCACCTGTTAAATGGAGAAAAAGGTGTCATGGGCATAAAGGAAAGAGAATCAATCATTTTAATAAAGCCCATTGCAATCTAGGGGGATGA 1422 0.4149 MVAGALPSVIRRLKREECKRTKHDSNFSDWKILIGPSDWEDYSRGKEGSARYRIHNLPEKLSPGVYELGIAVSRIGLGRKVYKLDPDRIVVVYLGKADIVRTRLQQYGRTGAHLSNNGLTSDPDDSNPACTYKGKGLFEEIFSHGYPVVYRWAPMQNKEDSKKTESQLLIVFDYAWNLSNNGTQRPGDILQKINKVASGLTTFWNMAKLLQPFTQRRVGIRIKSSSMPSPDVKLQEIDRGSHNFLSRVFKFGRSNPRLVQDVPGVIQDNTKRLCGVVLGDGSVCTRSPAEKRMRCVEHKGMRINGSTSKRTMKSENIDIELNVSEGYGEEHVPSVIQDNTTRFCGVVLGDGSFCIRLPVERRMRCVEHKGMRINGFTSKKTMKLKNNLDIELNVPYHLKSEGHGKKHVSQDFKDPSHIAVENPLDGRITNICGIIWNDGTPCRSPPVKWRKRCHGHKGKRINHFNKAHCNLGG 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0707 473 Pfam GIY-YIG domain-containing protein 27 190 - -
Lele48g0707 473 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 337 385 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0707 Lele-ChrLele48 11405711 11408518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0707 344 464 HRT Transcription Factor Family AT5G56780 36.364 4.54e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Lele48g0707 None None None