Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0700 ATGGCCGTAAATGAAGACACCGAACGAGAATATGTACCCCAGAAAGAGAAGCAATCTTCAGAGGAAGAGAAGAGGAAGAAGAAAATTGTACCTGGGAGTTTGATGAAAGCTCTATTGAGGCCTGGAGGTGGTGACTTGACACCTTCAGATGGTGATCAGATCATATATCATTGTACAATTCGAACTTTAGATGGAGTAGTTGTGCAATCTACCCGATCAGAATATGGAGGGAAGGGTGTCCCGACAAGACATGTATTGGGAAAAAGCAAGATGCTATTGGGTTTGTTGGAAGGAATTCCAACAATGTTGAAGGGTGAAGTAGCAATGTTCAAGATGAAGCCTCAGTTGCATTATGGTGAGGTTGACTGTCCCATTTCTGCTCCTGATGGGTTTCCAAAGGAAGATGAACTTCATTTTGAAATTGAGATGATAGATTTTTTCAAAGTCAAGGTTGTTACTGATGACTTGGGAGTTATAAAAAAGGTAATATGTGAAGGGCAGGGTTGGGAATCTCCACGAGAACCTTATGAAGTGAAAGCTTGGATATCAGCAAAGACAGTTACAGGGAAGTTGGTTGTGTCCCACATAGAAGAACCTTATTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATAGGAACAATGACACGGGGAGAGAAGGCTGTAATATTTGTTCGTAGTCAGTATCTAACTCAGTGTCCTCTGATGCCGCTGAATGAAGATTATGAAGAAGTCCAGTTTGAAGTGGAGCTTGTCCACTTTATTCAAGTTAGAGATATGCTTGGAGATGGGCGCCTAATAAAACGTCGGATTCGTGATGGGAAAGGTGATTTTCCAATGGATTGCCCTCTTCATGACAGTCTACTTAGCGTTCATTACAAGGGTATGGTTCTTGATGAAGAAAAGAAGGTATTCTATGACACGAGAGTTGATAATGATGGTCAACCACTGGAGTTCTGTTCTGGAGAAGGGCTTGTGCCAGAGGGGTTTGAAATGTGTGTACGTCTGATGTTGCCTGGAGAGGTAGCTCTCGTCACTTGCCCCCCAGACTTTGCTTATGATAAGTTTCCGAGGCCAGCAAATGTTCCTGAGGGTGCTAAAATTCAATGGGAAATTGAGCTTCTTGGTTTTGAAATGCCAAAGGACTGGACTGGATTTGACTTCCAAAGTATAATGGATGATGCTGAGAAGATTAGAAACACGGGTAACAGGCTGTTCAAAGAAGGAAAATATGAACTTGCCAAGGCAAAGTATGAAAAGTTACTTCGAGAATTTAATCACATCAATCCACAAGATGATGAGGAAGGAAAAGTATTTTCAGATACACGTAACTTGTTACATCTGAATGTGGCTGCATGCTATCTGAAATTGGGAGAATTTAGGAACTCCATTGAGTTTTGCAATAAGGTTTTGGATGCAAACCCTGCACATGTCAAGGGTCTTTACCGTCGTGGAATGGCCTACATGGCAGCTGGAGATTTTGAAGAAGCAAAGAGTGATTTCAACATGGTGATGAAAGTTGACAAGTCAACTGAACCAGACGCAACCTCGGCTCTTCTTAAACTGAAGCAGAAGGAGCAGGAAGCTGAGAAGAAGGCTCGAAAGCAATTCAAAGGCCTTTTCGACAAGAAACCTGGAGAAATTGCAGAATTCACTGCTGAAGAGGATAAAGATCAGAAGATAAGCGAAAGCAAGGAGGAGGAGGAAGAAGGACGTGGGGGGTCTGATTCAGAGAATTCACATGAAGTTGCACCAGATGCCCCTCAAGTGGGTTGGTTCTCTCGCTTTTTGCCAAGCAGATTATTATCATCCTTATGGCTTCGAAGATGTACCATTCTGTGA 1857 0.4243 MAVNEDTEREYVPQKEKQSSEEEKRKKKIVPGSLMKALLRPGGGDLTPSDGDQIIYHCTIRTLDGVVVQSTRSEYGGKGVPTRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKPQLHYGEVDCPISAPDGFPKEDELHFEIEMIDFFKVKVVTDDLGVIKKVICEGQGWESPREPYEVKAWISAKTVTGKLVVSHIEEPYFFTFGKSEVPKGLEMGIGTMTRGEKAVIFVRSQYLTQCPLMPLNEDYEEVQFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLSVHYKGMVLDEEKKVFYDTRVDNDGQPLEFCSGEGLVPEGFEMCVRLMLPGEVALVTCPPDFAYDKFPRPANVPEGAKIQWEIELLGFEMPKDWTGFDFQSIMDDAEKIRNTGNRLFKEGKYELAKAKYEKLLREFNHINPQDDEEGKVFSDTRNLLHLNVAACYLKLGEFRNSIEFCNKVLDANPAHVKGLYRRGMAYMAAGDFEEAKSDFNMVMKVDKSTEPDATSALLKLKQKEQEAEKKARKQFKGLFDKKPGEIAEFTAEEDKDQKISESKEEEEEGRGGSDSENSHEVAPDAPQVGWFSRFLPSRLLSSLWLRRCTIL 618
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0700 618 SUPERFAMILY FKBP-like 19 150 - -
Lele48g0700 618 SMART tpr_5 483 516 IPR019734 GO:0005515
Lele48g0700 618 SMART tpr_5 400 433 IPR019734 GO:0005515
Lele48g0700 618 SMART tpr_5 449 482 IPR019734 GO:0005515
Lele48g0700 618 ProSiteProfiles TPR repeat profile. 483 516 IPR019734 GO:0005515
Lele48g0700 618 MobiDBLite consensus disorder prediction 553 593 - -
Lele48g0700 618 MobiDBLite consensus disorder prediction 1 28 - -
Lele48g0700 618 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 175 256 IPR001179 GO:0003755
Lele48g0700 618 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 144 IPR001179 GO:0003755
Lele48g0700 618 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 380 IPR001179 GO:0003755
Lele48g0700 618 Gene3D Tetratricopeptide repeat domain 394 548 IPR011990 GO:0005515
Lele48g0700 618 Pfam Tetratricopeptide repeat 453 482 IPR019734 GO:0005515
Lele48g0700 618 Pfam Tetratricopeptide repeat 484 514 IPR019734 GO:0005515
Lele48g0700 618 SUPERFAMILY TPR-like 397 538 IPR011990 GO:0005515
Lele48g0700 618 MobiDBLite consensus disorder prediction 553 584 - -
Lele48g0700 618 FunFam Peptidylprolyl isomerase 8 150 - -
Lele48g0700 618 FunFam Peptidylprolyl isomerase 388 544 - -
Lele48g0700 618 FunFam Peptidylprolyl isomerase 261 385 - -
Lele48g0700 618 ProSiteProfiles TPR repeat profile. 449 482 IPR019734 GO:0005515
Lele48g0700 618 FunFam Peptidylprolyl isomerase 151 260 - -
Lele48g0700 618 SUPERFAMILY FKBP-like 152 259 - -
Lele48g0700 618 SUPERFAMILY FKBP-like 250 382 - -
Lele48g0700 618 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 260 IPR001179 GO:0003755
Lele48g0700 618 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 291 383 IPR001179 GO:0003755
Lele48g0700 618 PANTHER PEPTIDYLPROLYL ISOMERASE 152 259 - -
Lele48g0700 618 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 147 IPR001179 GO:0003755
Lele48g0700 618 Gene3D - 261 384 IPR046357 GO:0003755
Lele48g0700 618 Gene3D - 2 148 IPR046357 GO:0003755
Lele48g0700 618 Gene3D - 149 260 IPR046357 GO:0003755
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele48g0700 Lele-ChrLele48 10846383 10884728 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0700 47 548 Calmodulin-binding Proteins AT5G48570 31.068 5.01e-65 222