Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0687 ATGAGTCCGAGGAACGATGAAATGTATGTTCTGTTCGCTTTATGTCTAGATTCATGGGTTTTTGCTTCAGCATTGACTCTGATACAAAGGCCCCAGCACTTTCGTCCAGACTTGATTCTGGGAGAGGGTGGCTTTGGAGTTGTCTGTAAAGGTTTGATAGATGAAAATATAAGGCCAGGTTACAAGACCACACAGGTTGCTATTAAGGAGCTAAATAGAGAAGGAATTCAGGGTGATAGGGAATGGCTGGCTGAAGTTAACTATTTAGGCCAGTTCAGTGACCCAAATCTTGTAAAACTTATTGAATATTGTTGTGAGGATGAATATCGGCTACTGGTCTACGAATACATGGCAAGTGGGAGCTTGGAGAAACACCTTTTTCGCAGAACAGTTGAAGGGATCTTAAGTTATCAGCCATTTTCAAGGGTTGATACACAGCTATTTCGCCCTGAACATAATGAATTATATTCCTATATGCAAGAATTATCGAACTTGCTACTGTCAAATAAAGCATCCAGAGTGGGCTCAACGCTGACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAGAAGGGCTTGCTTTTCTTCATGGAGCACAGAGGCCCATCATATATCATGACTTCAAGACTGTAGAGATATTGTAG 648 0.412 MSPRNDEMYVLFALCLDSWVFASALTLIQRPQHFRPDLILGEGGFGVVCKGLIDENIRPGYKTTQVAIKELNREGIQGDREWLAEVNYLGQFSDPNLVKLIEYCCEDEYRLLVYEYMASGSLEKHLFRRTVEGILSYQPFSRVDTQLFRPEHNELYSYMQELSNLLLSNKASRVGSTLTWSKRMKIALHAAEGLAFLHGAQRPIIYHDFKTVEIL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0687 215 Gene3D Phosphorylase Kinase; domain 1 40 118 - -
Lele48g0687 215 ProSiteProfiles Protein kinase domain profile. 34 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0687 215 Pfam Protein tyrosine and serine/threonine kinase 39 210 IPR001245 GO:0004672|GO:0006468
Lele48g0687 215 ProSitePatterns Protein kinases ATP-binding region signature. 40 69 IPR017441 GO:0005524
Lele48g0687 215 PANTHER OS01G0588500 PROTEIN-RELATED 32 215 - -
Lele48g0687 215 Gene3D Transferase(Phosphotransferase) domain 1 151 215 - -
Lele48g0687 215 SUPERFAMILY Protein kinase-like (PK-like) 15 211 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0687 Lele-ChrLele48 8917542 8920097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0687 27 215 Receptor kinase-like Gene Family AT5G07280 37.368 2.04e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele48g0687 PK_Tyr_Ser-Thr 6.8e-19 CL0016