Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0686 ATGTCAGTTGACAGCATTGGAAGCATGCAAACAAGTAATGGTGGGGGATCTGTTGCAATGTCAATTGATAATAGCAGTGTTGGCTCCAATGATTCACATACTCGCATTTTAAACCACCAAGGGTTGCGAAGGCGGGCCAATGATAACTACTCTGTTGCTCACAGTGTGAACCGTAGAGGGAGAGTCACACATGCCCTGAGTGATGATGCTTTGGCTCAAGCTCTAATGGACAGCAGCTCCCCAACTGAGGGCCTTGACAATTTTGATGAGTGGACAATTGATTTGAGAAAGCTCAGTATGGGTGAGGCTTTTGCACAAGGGGCTTTTGGGAAACTCTACAGAGGGACTTACAATAATGAAGATGTTGCGATCAAAATATTGGAGAGGCCTGAAAATGATCTAGCAAAGGCTCAATTGATGGAACAACAGTTTCAGCAGGAGGTGATGATGCTTGCTACACTAAAGCATCCTAATATAGTTCGTTTTATTGGTGCATGCCGGAAGCCAAAGGTTTGGTGTATTGTAACAGAGTATGCTAAGGGCGGTTCAGTTCGACAGTTTTTAATGAAGCGCCAAAATCGATCAGTCCCCCTCAAATTGGCCGTCAAACAGGCTTTAGATGTTGCTAGGGGGATGGCGTATGTTCATGGCCTTCAATTGATCCACAGGGACCTGAAGTCCGACAACCTTTTAATTTTTGGTGACAAGTCTATTAAAATTGCAGACTTTGGAGTTGCTCGGATTGAGGTGCAGACGGAAGGAATGACACCTGAGACTGGAACATATCGTTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACACAAAAGGTGGATGTATATAGCTTTGGTATTGTTCTTTGGGAGCTCATCACCGGAATGCTTCCATTTCAGAACATGACAGCCGTACAAGCTGCATTTGCAGTCGTCAACAGAAATGTTCGTCCGACCATGCCCAACGACTGCTTACCCATTCTCCGAGACATCATGACAAGATGCTGGGATCCCAACCCCGATGTTAGGCCACCGTTTACCCAAATCGTAGCAATGCTAGAGAATGCCGAGACTGAGATAATGACGACTGTTCGCAAGGCCCGTTTCCGGTGTTGCATGACGCAACCCATGACATCTGACTGA 1140 0.4632 MSVDSIGSMQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLRRRANDNYSVAHSVNRRGRVTHALSDDALAQALMDSSSPTEGLDNFDEWTIDLRKLSMGEAFAQGAFGKLYRGTYNNEDVAIKILERPENDLAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPKVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLQLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPTMPNDCLPILRDIMTRCWDPNPDVRPPFTQIVAMLENAETEIMTTVRKARFRCCMTQPMTSD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0686 379 SUPERFAMILY Protein kinase-like (PK-like) 80 352 IPR011009 -
Lele48g0686 379 MobiDBLite consensus disorder prediction 1 33 - -
Lele48g0686 379 Gene3D Phosphorylase Kinase; domain 1 87 180 - -
Lele48g0686 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Lele48g0686 379 CDD STKc_MAP3K-like 105 352 - -
Lele48g0686 379 PANTHER SERINE-THREONINE PROTEIN KINASE 25 357 - -
Lele48g0686 379 FunFam Serine/threonine-protein kinase isoform 1 88 180 - -
Lele48g0686 379 ProSiteProfiles Protein kinase domain profile. 98 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0686 379 SMART serkin_6 98 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0686 379 FunFam serine/threonine-protein kinase HT1 181 374 - -
Lele48g0686 379 Pfam Protein tyrosine and serine/threonine kinase 99 352 IPR001245 GO:0004672|GO:0006468
Lele48g0686 379 PRINTS Tyrosine kinase catalytic domain signature 323 345 IPR001245 GO:0004672|GO:0006468
Lele48g0686 379 PRINTS Tyrosine kinase catalytic domain signature 176 189 IPR001245 GO:0004672|GO:0006468
Lele48g0686 379 PRINTS Tyrosine kinase catalytic domain signature 214 232 IPR001245 GO:0004672|GO:0006468
Lele48g0686 379 PRINTS Tyrosine kinase catalytic domain signature 279 301 IPR001245 GO:0004672|GO:0006468
Lele48g0686 379 PRINTS Tyrosine kinase catalytic domain signature 260 270 IPR001245 GO:0004672|GO:0006468
Lele48g0686 379 Gene3D Transferase(Phosphotransferase) domain 1 181 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0686 Lele-ChrLele48 8896586 8901031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0686 5 379 MAP Kinase Kinase Kinase AT2G24360 81.067 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele48g0686 PK_Tyr_Ser-Thr 7.3e-68 CL0016