Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0685 ATGCAAACAAGCAATGGAGGGGGATCTGTTGCAATGTCTATTGATAATAGCAGTGTTGGCTCCAATGATTCACATACTCGCATTTTAAACCACCAAGGGTTGCGAAGGCGGGCCAATGATAACTACTCTGTTGCTCACAGTGTGAACCGTAAAGGAAGAGTTACTCATGCTTTGAGTGATGATGCTTTGGCTCAAGCTCTAATGGACAGCAGCTCCCCAACTGAGGGCCTTGATAATTTTGATGAGTGGACAATTGATTTGAGAAAGCTCAGTATGGGTGAGGCTTTTGCACAAGGTGCTTTTGGGAAACTATACAGAGGTACCTACAATAATGAAGATGTTGCGATCAAAATATTGGAGAGGCCTGAAAATGATCTACCAAGGGCTCAGTTGATGGAACAACAATTTCAGCAGGAGGTCATGATGTTGGCTACACTAAAGCATCCTAATATAGTTCGTTTCATTGGTGCATGCCGTAAGCCAATGGTTTGGTGTATTGTAACGGAATATGCTAAAGGTGGTTCAGTTAGACAGTTTTTAATGAAGCGCCAAAATCGATCAGTTCCCCTTAAATTGGCTGTTAAACAGGCTTTGGATGTTGCAAGGGGGATGGCATATGTTCATGGCCTTCAATTTATCCACAGGGATCTGAAGTCCGACAACCTTTTAATTTTTGGTGACAAATCAATTAAAATTGCGGACTTTGGAGTTGCTCGGATTGAGGTGCAAACGGAAGGAATGACACCTGAAACTGGCACATATCGTTGGATGGCTCCAGAGATGATCCAACACAGGCCTTACACACAAAAGGTGGATGTATATAGCTTTGGTATTGTTCTTTGGGAGCTCATTACTGGAATGCTTCCATTTCAGAACATGACCGCTGTACAAGCGGCATTTGCAGTCGTGAACAGAAATGTTCGTCCGACCTTACCCAATGACTGCTTACCCATTCTCCGAGACATCATGACAAGATGCTGGGATCCCAACCCCGATGTTAGGCCACCATTTACCCAAATCGTAGCAATGCTAGAGAATGCCGAGACTGAGATAATGACGACTGTTCGCAAGGCCCGTTTCCGGTGTTGCATGACGCAACCCATGACATCTGACTGA 1116 0.4444 MQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLRRRANDNYSVAHSVNRKGRVTHALSDDALAQALMDSSSPTEGLDNFDEWTIDLRKLSMGEAFAQGAFGKLYRGTYNNEDVAIKILERPENDLPRAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLQFIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPTLPNDCLPILRDIMTRCWDPNPDVRPPFTQIVAMLENAETEIMTTVRKARFRCCMTQPMTSD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0685 371 Gene3D Phosphorylase Kinase; domain 1 79 172 - -
Lele48g0685 371 ProSiteProfiles Protein kinase domain profile. 90 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0685 371 MobiDBLite consensus disorder prediction 1 25 - -
Lele48g0685 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lele48g0685 371 SMART serkin_6 90 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0685 371 FunFam Serine/threonine-protein kinase isoform 1 80 172 - -
Lele48g0685 371 SUPERFAMILY Protein kinase-like (PK-like) 72 344 IPR011009 -
Lele48g0685 371 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 347 - -
Lele48g0685 371 Pfam Protein tyrosine and serine/threonine kinase 91 344 IPR001245 GO:0004672|GO:0006468
Lele48g0685 371 FunFam serine/threonine-protein kinase HT1 173 366 - -
Lele48g0685 371 Gene3D Transferase(Phosphotransferase) domain 1 173 368 - -
Lele48g0685 371 CDD STKc_MAP3K-like 97 344 - -
Lele48g0685 371 PRINTS Tyrosine kinase catalytic domain signature 206 224 IPR001245 GO:0004672|GO:0006468
Lele48g0685 371 PRINTS Tyrosine kinase catalytic domain signature 252 262 IPR001245 GO:0004672|GO:0006468
Lele48g0685 371 PRINTS Tyrosine kinase catalytic domain signature 168 181 IPR001245 GO:0004672|GO:0006468
Lele48g0685 371 PRINTS Tyrosine kinase catalytic domain signature 315 337 IPR001245 GO:0004672|GO:0006468
Lele48g0685 371 PRINTS Tyrosine kinase catalytic domain signature 271 293 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0685 Lele-ChrLele48 8874907 8880915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0685 1 371 MAP Kinase Kinase Kinase AT2G24360 81.671 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele48g0685 PK_Tyr_Ser-Thr 5.2e-67 CL0016