Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele48g0662 | ATGGCGAGAAAGTGCTCGCATTGTGGGAAAATAGGGCATAATTCTAGGACTTGCACATCTTTTAGAAGGACTTGTGGTGTAGGACTTCGTCTCTTTGGTGTTCAGCTTGAAACATCTTCTCCTTCTTCTTCTTCTACTTCTTCTTCTTGTGTTTTCGCCATGAAGAAAAGCTTGAGCATGGATTCTTTACCAGCTTCTTCGTCGTCCTCTCCATCTTCATCGTTCTCTAATTCATCAAGAATCACCATTGATGAAAACTCTGCGGCAGAGAGATCCTCTGTTGAGTATCTATCAGACGGTCTCATAGATGCTGCATCAGCACAAGACAGAAGAAAAGGAGTAGCTTGGACAGAAGATGAACACAGAAGATTTCTTGTTGGGCTTGAGAAGTTAGGAAAAGGTGATTGGAGAGGAATTTCCAGAAATTATGTCACAACAAGAACGCCTACTCAAGTAGCTAGTCATGCTCAAAAATACTTTCTTCGGCTCGCCGCCGTCAACAAGAACAAGAGACGACCAAGCCTCTTTGACATGGTGGGTATACAAGAGGATGTTAAATCTGGAAGCTCCAATAATAAGGGTGAAGAAGATGACCTGCAGAATCATACTAGCTTGACATTAATGGGCCAAAAGGGAACTAAATTTGAAGCAGCAATAGTGCCTACGTGGCAGCATAATAATTTCCATATGATGAAATCTTATTCTTCTTCACCCACATAA | 720 | 0.4181 | MARKCSHCGKIGHNSRTCTSFRRTCGVGLRLFGVQLETSSPSSSSTSSSCVFAMKKSLSMDSLPASSSSSPSSSFSNSSRITIDENSAAERSSVEYLSDGLIDAASAQDRRKGVAWTEDEHRRFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLAAVNKNKRRPSLFDMVGIQEDVKSGSSNNKGEEDDLQNHTSLTLMGQKGTKFEAAIVPTWQHNNFHMMKSYSSSPT | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele48g0662 | 239 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 3 | 200 | - | - | |
| Lele48g0662 | 239 | FunFam | transcription factor MYB1R1 | 114 | 165 | - | - | |
| Lele48g0662 | 239 | Gene3D | - | 114 | 166 | - | - | |
| Lele48g0662 | 239 | ProSiteProfiles | Zinc finger CCHC-type profile. | 3 | 20 | IPR001878 | GO:0003676|GO:0008270 | |
| Lele48g0662 | 239 | CDD | SANT | 115 | 160 | IPR001005 | - | |
| Lele48g0662 | 239 | SUPERFAMILY | Homeodomain-like | 110 | 163 | IPR009057 | - | |
| Lele48g0662 | 239 | Pfam | Myb-like DNA-binding domain | 115 | 160 | IPR001005 | - | |
| Lele48g0662 | 239 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 108 | 164 | IPR017930 | - | |
| Lele48g0662 | 239 | ProSiteProfiles | Myb-like domain profile. | 108 | 160 | IPR001005 | - | |
| Lele48g0662 | 239 | ProSiteProfiles | SANT domain profile. | 116 | 164 | IPR017884 | - | |
| Lele48g0662 | 239 | SMART | sant | 112 | 162 | IPR001005 | - | |
| Lele48g0662 | 239 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 112 | 162 | IPR006447 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele48g0662 | Lele-ChrLele48 | 8132814 | 8133997 | Wgd |
Transcription factors information