Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0660 ATGGTAGCGGGAGATTTACCCTCAGTCATTCGCAGGTTGAAGAGAGAAGAATGTCAACGAACAAAGCATGATTCCAACTTCTCTGATTGGAAGATTCTCATTGGCCCTTCAGATTGGGAAGACTACTCTAGAGGGAAGGAAGGGTCAGCTAGGTACAGAATTCATAACCTCCCAGAAAAATTGAATCCAGGAGTTTATGAGCTTGGTATTGCTGTGTCTCGCATTGGTTTAGGCCGTAAGGTTTACAAGCTTGATCCAGACCGTATAGTTGTGGTTTACCTCGGAAAAGCTGACATTGTGAGAACAAGACTCCAACAGTATGGCCGAACTGGAGCTCATTTGAGCAATAACGGCTTAACTTCTGATCCAGATGATAGTAATCCTGCTTGTACCCATAAAGGGAAGGGACTTTTTGAAGAAATATTTTCACAAGGTTATCCGGTTGTTTATAGATGGGCTCCTATGCAAAACAAAGAAAATGCCAAGAAAACGGAAAGTCAGCTGCTCAGTGTATTTGATTATGCATGGAATGTGAGCAATAATGGTACCCGACGCCCAGAAGATATTCTTCAGAATATTAATAAAGTTGCTTCAGGTCCCACAACATTTTCAAACATGACCAAGCTGCTTCAACCTTTCACACAGAGGCGAGTAGGTATCGCAATCAAATCAAGCAGCGTGCCTTCCCCAGAAGTCAAATTACAAGAAATTGACAGAGGCAGCCATAATTTCTTATCTCGAGTATTTAAAATTGGCAGATCAAATCCAAGGTTAGTTCAAGATGTCCCTGGTGTAATTCAGGACAATACTACAAGACTTTGTGGAGTGGTCTTGGGTGATGGTTCTGTTTGTACAAGATCACCAGCTGAAAGAAGAATGAGGTGTGTAGGACACAAAGGAATGAGAATAAATGGGTCCACTTCCAAAAGAACAATGAAGTCAGACAACAATCTTGACATAGAACTCAATGTGAGCGAAGGCTATGGTGAAGAACTTATCCCTAGTGTCATTCAGGACAATACTACAAGATTTTGTGGAGTGGTCTTGGGTGATGGTTCTGTTTGTACAAGACTACCTGTTGAAAGAAGAATGAGGTGTGTAGAACACAAAGGAATGAGAATAAATGGGTTCACTTCCAAAAAGACAATGAAATCAGAGAACAATCTGGACATAGAACTCAACGTGCCCTATCACCTGAAGAGCGAAGGCCATGGTGAAAAGCATGTTAGCCAAGATTTGAAAGACCCTTCCCATATTGCAGTTGAGAATTCTCTTGATGGTAGAATTACCAATATATGTGGAATAATTTTGAATGATGGTACCCCTTGTAGGAGTCCACCTGTTAAAGGGAGGAAAAGGTGTCATGAGCATAAAGGAAAGAGAATCAATCATTTTAATAAAGCCCATTGCAATCTAGGGGGATGA 1425 0.4119 MVAGDLPSVIRRLKREECQRTKHDSNFSDWKILIGPSDWEDYSRGKEGSARYRIHNLPEKLNPGVYELGIAVSRIGLGRKVYKLDPDRIVVVYLGKADIVRTRLQQYGRTGAHLSNNGLTSDPDDSNPACTHKGKGLFEEIFSQGYPVVYRWAPMQNKENAKKTESQLLSVFDYAWNVSNNGTRRPEDILQNINKVASGPTTFSNMTKLLQPFTQRRVGIAIKSSSVPSPEVKLQEIDRGSHNFLSRVFKIGRSNPRLVQDVPGVIQDNTTRLCGVVLGDGSVCTRSPAERRMRCVGHKGMRINGSTSKRTMKSDNNLDIELNVSEGYGEELIPSVIQDNTTRFCGVVLGDGSVCTRLPVERRMRCVEHKGMRINGFTSKKTMKSENNLDIELNVPYHLKSEGHGEKHVSQDLKDPSHIAVENSLDGRITNICGIILNDGTPCRSPPVKGRKRCHEHKGKRINHFNKAHCNLGG 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0660 474 Pfam GIY-YIG domain-containing protein 27 190 - -
Lele48g0660 474 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 338 390 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0660 Lele-ChrLele48 8096514 8099333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0660 345 465 HRT Transcription Factor Family AT5G56780 36.364 2.32e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Lele48g0660 None None None