Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0658 ATGCAAACCTTTGCATCCACCGGCTTCAGTCAAGAACATGGCCCCATCAATGGAGATCTTTGCTTTCACACTACCAACAAATCCTTCTTCTCTGGGTCTCTTCCTTATTACCAGACGCCATCAAGTAGTACTGTGGATTCATCAAAATCACCTAAGTCATCAAATTTAAGCAATAGGAAGCCATCTATAAATATCACCATCCCTCCATTGGGCTTAAAGATGAGCTCATCATCGTCGTCGTCGTCATCATCAGATGTCACAGAGGATAAGCACTACCGAGGGGTTCGACGGCGGCCGTGGGGGAAGTTCGCGGCCGAGATTCGTGACCCGAATCGAAAGGGATCAAGGGTGTGGCTAGGAACCTTCGATACAGCCATGGAAGCAGCAAAAGCATATGATAGAGCTGCGTTTAAGATGAGAGGAAGCAGAGCTATACTAAATTTCCCTCTTGAAATTGGAGGAACAATAAGTTCTGAAGAATCAAAATCAACAGTGGAAAAGGTAGTTCGTGAGAAAAGGGGAATTGAGGAACAAGAAAGTGATGAACAGAACAAGGATGAAGAATTCAAGAAGATGAAGAAGAAGGAAGAGGCAGTTTCACCCGCAGGTGGGGTTGTTTCTTCTTCCTCCTCTGCAACAGTTGGTCCGTTAACGCCGTCATGTTGGAAGGGGTTTTGGGATACTGAGGTTGCTAACACTATTTTCAGTGTTCCTCCGTTATCGCCGTTATCTCCCTCAATGATGATTGTGACGTAG 756 0.455 MQTFASTGFSQEHGPINGDLCFHTTNKSFFSGSLPYYQTPSSSTVDSSKSPKSSNLSNRKPSINITIPPLGLKMSSSSSSSSSSDVTEDKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAMEAAKAYDRAAFKMRGSRAILNFPLEIGGTISSEESKSTVEKVVREKRGIEEQESDEQNKDEEFKKMKKKEEAVSPAGGVVSSSSSATVGPLTPSCWKGFWDTEVANTIFSVPPLSPLSPSMMIVT 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0658 251 MobiDBLite consensus disorder prediction 38 85 - -
Lele48g0658 251 Coils Coil 175 195 - -
Lele48g0658 251 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
Lele48g0658 251 SUPERFAMILY DNA-binding domain 91 151 IPR016177 GO:0003677
Lele48g0658 251 Pfam AP2 domain 91 141 IPR001471 GO:0003700|GO:0006355
Lele48g0658 251 CDD AP2 90 149 IPR001471 GO:0003700|GO:0006355
Lele48g0658 251 FunFam Ethylene-responsive transcription factor 2 90 151 - -
Lele48g0658 251 MobiDBLite consensus disorder prediction 173 198 - -
Lele48g0658 251 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Lele48g0658 251 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Lele48g0658 251 MobiDBLite consensus disorder prediction 173 215 - -
Lele48g0658 251 MobiDBLite consensus disorder prediction 38 93 - -
Lele48g0658 251 Gene3D AP2/ERF domain 90 151 IPR036955 GO:0003700|GO:0006355
Lele48g0658 251 PANTHER DNA-BINDING DOMAIN 53 192 IPR044808 GO:0003700|GO:0009873
Lele48g0658 251 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0658 Lele-ChrLele48 8069112 8069867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0658 53 251 AP2-EREBP Transcription Factor Family AT5G51190 47.805 1.37e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele48g0658 AP2 8.4e-16 CL0081