Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0652 ATGGGGAACAATTGTGTTGGTCCGAGCATTTCCAAAAATAGTATTCTCCAATCAGTTTCTGCAGTAATATGGAAATCTCGTGCACTCGATGATGAACCAGTTTCTAATAGAGGAACTGTAAATGAGGAAACAGGTAGAGAACCGGAATCATCGTCCATGCCTGTCCAATGCAAGCCCCCTGAGCAAATGACTATGCCAAAGCTGGAAGTGAAACCAGAAGAGAAGCCAGAATCCAAACCAGAAGCCAAATCGGACCAAGACCAGAAGTCTAAACACAATAAACCTGTTTCGATAAAAAGGGTGTCTAGTGCAGGGCTTCGTGTTAATTCTGTATTACAAACAAACACTGGTAATTTCAAGGAGTTCTATATTCTGGGGAGAAAACTGGGACAGGGTCAGTTTGGTACAACATTTTTATGTGTGGAGAAGGCAACGGGTAGAGAGTATGCCTGTAAATCTATGGCAAAAAGGAAGATGGTAACTGACGAGGATGTTGAGGATGTGAGAAGAGAAATTCAGATAATGCATCACTTGGCGGGGCATCCTAATGTTATATCCATCAAAGGTGCTTATGAAGATGCATTAGCTGTTCATGTTGTTATGGAGTTATGTGCAGGTGGTGAGCTTTTTGACAGGATTATTCAGCGTGGACATTATACAGAAAGAAAGGCAGCCAACCTAATCAGGACTATAGTTGGGGTTGTGGAAGCTTGTCATTCTCTTGGTGTGATGCATAGGGATCTTAAACCTGAGAACTTTCTTTTTGTCAATCAGCAGGAGGATTCTCCTCTCAAAACCATAGACTTCGGATTATCTATATTTTTTAAACCAGGTGATGTATTCACTGATGTGGTTGGCAGCCCTTATTATGTTGCCCCAGAGGTTTTGCGAAAGTGTTATGGCCCAGAAGCAGATGTTTGGAGTGCTGGGATAATACTTTACATTCTTTTGAGTGGAGTCCCTCCATTTTGGGCGGAAAGTGAGGAAGGAATATTTAAAGAGGTTCTGCATGGTGATCTTGACTTTTCTTCTGATCCCTGGCTCAGCATTTCTGAAAGTGCCAAAGATTTAGTAAGGAAAATGCTTGTTCGTGATCCTAGAAGGCGGCTGACTGCACATCAAGTTTTATGCCATCCTTGGATTCAAGTAGATGGCATAGCTCCTGACAAACCACTTGATTCTGCTGTATTAACTCGATTGAAGCAATTCTCTGCTATGAATAGGTTCAAGAAAATGGCTCTTATAGTTATTGCAGAGAGCTTATCTGAAGAAGAAATAGCTGGCTTGAAAGAAATGTTCAAGATGATAGATACAGACAATAGTGGTCAAATCACATTTGATGAGCTTAAGGCTGGTTTGAGAAGAGTGGGTGCTAATCTTAAGGAGTCTGAAATTCATGATTTGATGCAAGCAGCTGATATTGACAATAGCGGAACTATCGATTATGGGGAGTTTATAGCTGCAACATTGAATCGAAACAAGATTGAAAGAGAAGATCACCTTGTTGCAGCTTTTTCTTACTTTGATAAGGATGGAAGTGGCTATATTACTCTGGATGAACTTCAACAAGCTTGTGAGGAGTTTGGTGTGGAAGATATCCGCTTGGAAGAGATAATCAAGGAAATCGATCAAAATAACGACGGGAGGATAGATTATAATGAGTTTGTAGCCATGATGCAGAAAGGAAATGTTCCAGTAATTGGTAGGAAGGGACTAGAAAATAGCTTCAGCATCGGTTTTAGGGGAAGGCATTAA 1755 0.4091 MGNNCVGPSISKNSILQSVSAVIWKSRALDDEPVSNRGTVNEETGREPESSSMPVQCKPPEQMTMPKLEVKPEEKPESKPEAKSDQDQKSKHNKPVSIKRVSSAGLRVNSVLQTNTGNFKEFYILGRKLGQGQFGTTFLCVEKATGREYACKSMAKRKMVTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDALAVHVVMELCAGGELFDRIIQRGHYTERKAANLIRTIVGVVEACHSLGVMHRDLKPENFLFVNQQEDSPLKTIDFGLSIFFKPGDVFTDVVGSPYYVAPEVLRKCYGPEADVWSAGIILYILLSGVPPFWAESEEGIFKEVLHGDLDFSSDPWLSISESAKDLVRKMLVRDPRRRLTAHQVLCHPWIQVDGIAPDKPLDSAVLTRLKQFSAMNRFKKMALIVIAESLSEEEIAGLKEMFKMIDTDNSGQITFDELKAGLRRVGANLKESEIHDLMQAADIDNSGTIDYGEFIAATLNRNKIEREDHLVAAFSYFDKDGSGYITLDELQQACEEFGVEDIRLEEIIKEIDQNNDGRIDYNEFVAMMQKGNVPVIGRKGLENSFSIGFRGRH 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0652 584 MobiDBLite consensus disorder prediction 38 58 - -
Lele48g0652 584 ProSitePatterns EF-hand calcium-binding domain. 509 521 IPR018247 -
Lele48g0652 584 ProSitePatterns EF-hand calcium-binding domain. 543 555 IPR018247 -
Lele48g0652 584 SUPERFAMILY Protein kinase-like (PK-like) 122 382 IPR011009 -
Lele48g0652 584 SMART efh_1 534 562 IPR002048 GO:0005509
Lele48g0652 584 SMART efh_1 428 456 IPR002048 GO:0005509
Lele48g0652 584 SMART efh_1 500 528 IPR002048 GO:0005509
Lele48g0652 584 SMART efh_1 464 492 IPR002048 GO:0005509
Lele48g0652 584 SMART serkin_6 123 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0652 584 Gene3D Phosphorylase Kinase; domain 1 124 208 - -
Lele48g0652 584 ProSiteProfiles EF-hand calcium-binding domain profile. 496 531 IPR002048 GO:0005509
Lele48g0652 584 FunFam CDPK-related kinase 3 115 283 - -
Lele48g0652 584 SUPERFAMILY EF-hand 421 561 IPR011992 -
Lele48g0652 584 Gene3D - 406 565 - -
Lele48g0652 584 ProSiteProfiles EF-hand calcium-binding domain profile. 534 565 IPR002048 GO:0005509
Lele48g0652 584 CDD EFh 500 560 IPR002048 GO:0005509
Lele48g0652 584 ProSiteProfiles EF-hand calcium-binding domain profile. 424 459 IPR002048 GO:0005509
Lele48g0652 584 Gene3D Transferase(Phosphotransferase) domain 1 209 405 - -
Lele48g0652 584 ProSiteProfiles Protein kinase domain profile. 123 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0652 584 CDD STKc_CAMK 122 380 - -
Lele48g0652 584 FunFam Calcium-dependent protein kinase 1 125 208 - -
Lele48g0652 584 FunFam Calcium-dependent protein kinase SK5 291 386 - -
Lele48g0652 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Lele48g0652 584 PANTHER SERINE/THREONINE-PROTEIN KINASE 113 555 - -
Lele48g0652 584 MobiDBLite consensus disorder prediction 26 100 - -
Lele48g0652 584 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Lele48g0652 584 CDD EFh 429 488 IPR002048 GO:0005509
Lele48g0652 584 FunFam Calcium-dependent protein kinase 1 389 563 - -
Lele48g0652 584 ProSiteProfiles EF-hand calcium-binding domain profile. 460 495 IPR002048 GO:0005509
Lele48g0652 584 ProSitePatterns EF-hand calcium-binding domain. 473 485 IPR018247 -
Lele48g0652 584 ProSitePatterns EF-hand calcium-binding domain. 437 449 IPR018247 -
Lele48g0652 584 Pfam Protein kinase domain 125 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0652 584 MobiDBLite consensus disorder prediction 67 94 - -
Lele48g0652 584 Pfam EF-hand domain pair 500 560 IPR002048 GO:0005509
Lele48g0652 584 Pfam EF-hand domain pair 429 489 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0652 Lele-ChrLele48 7671366 7685623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0652 1 581 EF-hand Containing Proteins AT5G04870 75.000 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele48g0652 Pkinase 3.7e-73 CL0016