Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele48g0619 | ATGATCACAGATACGGACCCTCCTCCTGCTCCTCCCACTGTTTCGGCCTCCACAGGTTCTGCCTCACCTTCCTCCTCTTCCAATGCCTCGAATTCTTCATCCCATTCTGCCTCCGTTCCGCCTCCCGCCGATGCTGATCAGGCCGCACAGCCACCGGCTCCGAAACTTGTGATTTCCTCCAAGGATTCCAATTCGCTCTTCAGCGGTGGTGGCGTCAGTTTCAAGGGTAAAAGGACTTCAATGGAGGATTTCTATGAGACTAGGATATCCGAGGTGGATGGTCAGATGGTTGCCTTTTTTGCTGTTTTTGATGGCCATGGAGGTTCTCGGACTGCTGAATACCTGAAAAAGAATCTCTTTAAAAATATAAGCAGCCATCCTGACTTTATCAAAGACACAAAGACTGCTATTGTTGAAGCATTTAAACAGACAGATGTCAATTACCTGAAAGAGGAAAAGGGTTATCACAGAGATGCTGGGTCCACTGCATCAACAGCTGTATTGGTGGGGGATCGAATTGTTGTTGCCAATGTTGGTGATTCCAGAGTAGTTGCTTCTAGAGCTGGTTCAGCTGTCCCTTTGTCAATTGATCACAAACCTGATAGATCTGATGAACGTCTTAGAATTGAACAGGCTGGGGGATTCGTTATTTGGGCAGGTATATTTGCTGTTCTGTTTCCCGTGCATTCGGTGACAAACTTCTTAAACCATATGTTGTTGCTGATCCAGAAATTCAGGAAGAAGAGATTGACGGTGTAG | 759 | 0.4651 | MITDTDPPPAPPTVSASTGSASPSSSSNASNSSSHSASVPPPADADQAAQPPAPKLVISSKDSNSLFSGGGVSFKGKRTSMEDFYETRISEVDGQMVAFFAVFDGHGGSRTAEYLKKNLFKNISSHPDFIKDTKTAIVEAFKQTDVNYLKEEKGYHRDAGSTASTAVLVGDRIVVANVGDSRVVASRAGSAVPLSIDHKPDRSDERLRIEQAGGFVIWAGIFAVLFPVHSVTNFLNHMLLLIQKFRKKRLTV | 252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele48g0619 | 252 | SUPERFAMILY | PP2C-like | 62 | 226 | IPR036457 | - | |
| Lele48g0619 | 252 | ProSitePatterns | PPM-type phosphatase domain signature. | 99 | 107 | IPR000222 | GO:0043169 | |
| Lele48g0619 | 252 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
| Lele48g0619 | 252 | Gene3D | - | 50 | 246 | IPR036457 | - | |
| Lele48g0619 | 252 | ProSiteProfiles | PPM-type phosphatase domain profile. | 68 | 252 | IPR001932 | - | |
| Lele48g0619 | 252 | SMART | PP2C_4 | 58 | 242 | IPR001932 | - | |
| Lele48g0619 | 252 | CDD | PP2Cc | 67 | 235 | IPR001932 | - | |
| Lele48g0619 | 252 | PANTHER | PROTEIN PHOSPHATASE | 38 | 224 | - | - | |
| Lele48g0619 | 252 | MobiDBLite | consensus disorder prediction | 15 | 40 | - | - | |
| Lele48g0619 | 252 | Pfam | Protein phosphatase 2C | 69 | 218 | IPR001932 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele48g0619 | Lele-ChrLele48 | 6438240 | 6444010 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele48g0619 | 56 | 224 | PP2C-type Phosphatase Gene Family | AT1G43900 | 68.649 | 3.11e-86 | 259 |