Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0608 ATGTCTTCTCACATAGTTGCAGATCCTGAGAGCTCAGATACGACGTCGTATCTAAGCTCCATTGAGCTCAACAGTTTCCCGAGTCTTCCCACTACTGATCATCATCATCATCAGTCTCCCACGCTTGGTCAACTTCTAAAGCATGTCGGAGATGTACGCAAGGAAGCCACAGGAGACGGCAGCGAGACGCCGCTGCATCATGCTCTTGACGTTGGAGCTGGTCATGCAGGACTTGAGCATCGTTCTCTTCCTTTTGTGCTGTCTTTTGGCAATCTAACTTACAACGTCAAGGTTCGCCGGAAAATGAACTTCTCGGCATTTGGTTCGCGGGGGAGAAACCGTCTTGGTGCTGCTGCTGTTGATGCTACCATGGGTGAAGAGAGCTTGTTCTCTAGTACAAAGACCCTTCTGGATGACATCTCCGGCGAGGCTCGCGACGGCGAGATCATGGCTGTGATGGGCGCTAGTGGTTCCGGCAAGTCTACGCTTATTGATGCCTTGGCTAACCGGATAGCAAAGGGAAGCTTAAAAGGAACTGTGGCTCTCAACGGCGAGGCCTTGAACTCCCGGCTTCTTAAGACGATTTCAGCTTATGTAATGCAAGACGATCTGTTATTTCCGATGCTCACCGTCGAAGAGACTCTCATGTTCGCGGCGGAGTTCCGATTGCCTCGAACCCTTTCAAAATCCAAGAAGAAAATGCGAGTCCAAGCTCTGATAGACCAGCTCGGCCTCCGCAACGCCGCTAATACCGTCATCGGAGACGAAGGCCACCGTGGGGTATCCGGGGGAGAACGGCGGCGCGTGTCCATCGGCATTGACATAATACACGACCCTATCGTCCTCTTCCTCGACGAGCCTACTTCTGGACTTGACTCCACCAGCGCTTTCATGGTGGTGAAGGTTCTTCAGAGAATTGCTCAAACCGGAAGCATCGTGATCATGTCCATTCATCAACCTAGTTACAGAATCCTTGGACTCCTTGAGAGAATGATCTTCCTGTCGCGTGGGAAAACAGTTTACAGTGGCTCTCCGATGCAGCTCCCGACCTTCTTCGCCGAGTTCGGCCACCCGATACCGGAAAACGAGAACCGAACCGAGTTCGCTCTCGATCTGATTCGCGAACTCGAACGCTCACCAGGTGGAACCAAGAGCTTAGTTGAGTTCAACAAATCATGGCAGAACAAGAAGCATATTGAAAACTCAAGCTCTACTAATAACCTCAGTCCTGGACAGAGTTCATCTCTGAAAGAAGCGATCAGCGCGAGTATTTCTAAAGGGAAATTAGTTTCCGGCGCGACGACCACAAACACAAGCTCAAGTTTATTATCATCATCTTCATCTTCATGGATAGTTCCGACATATGCGAACCCGTTTTGGATCGAGCTGGCGACACTGTCGAAGAGATCCTTTACGAATTCTCGCCGGATGCCGGAGCTATTAGCGATGAGACTCGGCACGGTTATGGTCACCGGATTCATTCTCGCCACCGTGTTCTGGCATTTAGATAACTCTCCCAAAGGGATCCAAGAAAGACTCGGCTTTTTCGCATTTGCCATGTCCACCACCTTCTACACCACTGCCGACGCACTCCCGGTGTTCCTTCAAGAACGACACATCTTCATGAGAGAAACCTCCCACAACGCTTACCGGCGATCATCCTACCTCATCTCTCACGCTCTCGTCGCCTTCCCTCCATTAATCTTCCTCTCTTTAGCCTTCGCCGTCACCACCTTCTTCGCGGTTGGCCTCGACGGAGGCTTCTCCGGCTTCGCCTTCTACTTCGCCATCATCCTCGCCTCGTTCTGGGCCGGAAACTCCTTCGTCACCTTCCTCTCCGGCCTGGTTCCTCACGTGATGTTGGGCTACACCATCGTCGTCGCCATATTAGCCTACTTCTTACTCTTCAGTGGCTTCTTCATAAACAGAGATCGAATTCCGGCGTACTGGATATGGTTCCATTACATATCTCTGGTGAAATATCCATTTCAGGCGGTTCTTCAGAACGAATTCGGCGACCCGATGAAGTGCTTCGTGAAGGGGGTTCAGATCTTCGATAATACGCCGTTAGGGTTGGTGCCGGAGACGATGAAGGTGAAGCTATTGAAGAGCATGAGCGAGACGTTAGGTGTGAGCATAACGAGCTCAACATGCTTGACGACTGGTTCAGACATATTGCAACAGTACGGAGTTTTGGATTTGAGCAAGTGGAATTGCTTGTGGGTCACTGTGGCTTGGGGCTTCTTTTTTAGGATTTTGTTTTACTTCATGTTGTTGGTCGGAAGCAAGAACAAGAGAAGATAA 2304 0.5056 MSSHIVADPESSDTTSYLSSIELNSFPSLPTTDHHHHQSPTLGQLLKHVGDVRKEATGDGSETPLHHALDVGAGHAGLEHRSLPFVLSFGNLTYNVKVRRKMNFSAFGSRGRNRLGAAAVDATMGEESLFSSTKTLLDDISGEARDGEIMAVMGASGSGKSTLIDALANRIAKGSLKGTVALNGEALNSRLLKTISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKMRVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQTGSIVIMSIHQPSYRILGLLERMIFLSRGKTVYSGSPMQLPTFFAEFGHPIPENENRTEFALDLIRELERSPGGTKSLVEFNKSWQNKKHIENSSSTNNLSPGQSSSLKEAISASISKGKLVSGATTTNTSSSLLSSSSSSWIVPTYANPFWIELATLSKRSFTNSRRMPELLAMRLGTVMVTGFILATVFWHLDNSPKGIQERLGFFAFAMSTTFYTTADALPVFLQERHIFMRETSHNAYRRSSYLISHALVAFPPLIFLSLAFAVTTFFAVGLDGGFSGFAFYFAIILASFWAGNSFVTFLSGLVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPAYWIWFHYISLVKYPFQAVLQNEFGDPMKCFVKGVQIFDNTPLGLVPETMKVKLLKSMSETLGVSITSSTCLTTGSDILQQYGVLDLSKWNCLWVTVAWGFFFRILFYFMLLVGSKNKRR 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0608 767 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 56 753 - -
Lele48g0608 767 Gene3D - 127 352 IPR027417 -
Lele48g0608 767 FunFam ABC transporter G family member 6 126 352 - -
Lele48g0608 767 SMART AAA_5 146 338 IPR003593 -
Lele48g0608 767 Pfam ABC-2 type transporter 318 402 IPR043926 GO:0140359
Lele48g0608 767 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 117 361 IPR003439 GO:0005524
Lele48g0608 767 Pfam ABC-2 type transporter 463 671 IPR013525 GO:0016020|GO:0140359
Lele48g0608 767 Pfam ABC transporter 137 289 IPR003439 GO:0005524
Lele48g0608 767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 352 IPR027417 -
Lele48g0608 767 ProSitePatterns ABC transporters family signature. 261 275 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0608 Lele-ChrLele48 6137756 6140059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0608 136 321 Calmodulin-binding Proteins AT2G36910 29.101 2.64e-10 62.4