Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0591 ATGGGGATTTTGGAAGTGGGCATGGTGGGTAAAGACGACACTCGAAAAATGTTCTGGCGGTCGGCCTCTTGGTCGGCGTCTCGCTCCGCCTCACACAATCCGGACGGCGACGGAAAGGACTTCGTAGATCCGGATGGGAGTGTTGGTAATATCAACGGCGAAACTCGTAGGTATCCTCCCGCTCCATTAACCCCTCGATCGCAGCAAAATTGCAAGGCACGGTCTTTTTTGCCCCCGTTACAGCCGCTTTCAATTGCTCGGAGGAGCTTGGATGAGTGGCCGAAAGCGAGTTCTGATGATATCGGTGAGTGGCCTCATCCCCCAACTCCTAGTGGAAGAGGTAATGGAGAGAGGTTGAAGCTTGATTTATCATCGATTCAGCGAAACCCTGATAAGAATGCTGGGCTTGTGAAAAGAGATAAGATTGCATACTTTGATAAAGAATGCTCAAAAGTGGCTGAACATATTTATCTTGGAGGAGACGCTGTTGCTAGGGATAGGGATATATTGAAGCAAAATGGGATTACTCATATTTTGAACTGTGTGGGCTTTGTTTGTCCTGAGTACTTCAAATCTGATTTTGTATATAGAACGTTGTGGTTGCAGGATAGTCCGACGGAAGATATTACTAGTATTCTGTATGATGTCTTTGACTACTTTGAGGATGTTAGGGAACGATATGGAAGGGTGTTTGTGCATTGTTGCCAGGGGATTGTTCGCTATGAGAAAGTGCAAGGTTCGATTTGGTTAATCAAGGAGGGTGAAGAACCGGATTACTTTTGGGATGCCTTTTCTAAGTTTTTGCCTTTGATGGAAAAATCTGATAATAGAGTAGAAAATGGCAAATCAGCCAGAAATATTTCTCCTGGTGAGAGGATAGTGGACTCATATAACGTTGATTTTGAAGTTTTCCAGAAAGCTATCATGGGAGGTTTTGTGCCTCCATTTGCTTCAGCAGAGGATGAACTTGAAACCCACCTTCCTGCTAGGGAGAGCTGTTGGAGTGTGTTAAGGCGTAAGTTTGCCTCTGCCAACATGAAGGAATTTGTCTCAGAGCCTAAATTATCATATTCAAGGGTTTATTTGGATTCAGTGTCAAGTACTCATTCATCGGTAAAGTCATCTCCATCATCATCACTGTCATCAACTACGTCTTCTTCATCTCCTTATCTCTCACCAGATTCCTTTACTTCTGATTCGAGCAATAGTTCAAAGTGTTCTGAAACGTCTCTTGATTCTCCTTATGCAGTTTTGACTTCTACGCCTGCATCCTCATCTTTATCTAACTTCTCTAACTTGTCCCTCCTTTCATCTAGTTGTTATTCTCAACCAGTAACAAAAGGTGCGGAAACTTGTGTCAAGTTGGCATCACAGCCCTGTCATCAGTCAGCCTCCCTGATATTGAAAAAACCATCAACTTCTCTTGCTGAGCGCAGAGGCAGTCTGTCAAAGTCTTTGAAGTTACCACTGATGAATGATAAAACACTGGTGATGAATAGATCATCAACTTTTAATGCTACTCGAGAAGATGGTGCTGTCATGAATGGCAGTACTAGCCATTTGCATCAATCAAATAGTATCGAAAATTCATCTGATCTAAACAACCATGTCAAGGGTAGAGTTTTGGATTCAACTCAACTGTGCGAGGCAGATAGTGTTGACTACAGCAAAGCTTCATTTGTTGGAAACTCTAATGACTCTTGGGTGAGAAGCTCTTCAAGGGAAGACATAAAGTCTACTTCATCAAATGGAATGGATGGAAGTGGTCTCCTACAATCTAATAAACAAAATTTAGTTTATCAATGGCCCAGCTTAGAGAAGATTGTGACATTCGGTGCAAAGCATTTGGATTCTAAAGCAGCTTTTGTTATTTTCTCTTCAAGTACAAGTTCTGGTAAACATGCAAGAAACATTTTATATTTTTGGCTGGGAGATTCTTTCAGCTGTGCTGCATCTCAGGTTCGATTAGATCATAATAGAGAGATAGATTGTCGAGGAGGAGTCGACTGGAATCAAGTTGGTTGTGATATCCTTGCTCATTTTGGTTTGCCAAATGACACTATCATCAAGATTATTAAAGAGAATGAAGAACCAGAAGATTTTCTTACCTTACTGAGTACATTGTAG 2127 0.4189 MGILEVGMVGKDDTRKMFWRSASWSASRSASHNPDGDGKDFVDPDGSVGNINGETRRYPPAPLTPRSQQNCKARSFLPPLQPLSIARRSLDEWPKASSDDIGEWPHPPTPSGRGNGERLKLDLSSIQRNPDKNAGLVKRDKIAYFDKECSKVAEHIYLGGDAVARDRDILKQNGITHILNCVGFVCPEYFKSDFVYRTLWLQDSPTEDITSILYDVFDYFEDVRERYGRVFVHCCQGIVRYEKVQGSIWLIKEGEEPDYFWDAFSKFLPLMEKSDNRVENGKSARNISPGERIVDSYNVDFEVFQKAIMGGFVPPFASAEDELETHLPARESCWSVLRRKFASANMKEFVSEPKLSYSRVYLDSVSSTHSSVKSSPSSSLSSTTSSSSPYLSPDSFTSDSSNSSKCSETSLDSPYAVLTSTPASSSLSNFSNLSLLSSSCYSQPVTKGAETCVKLASQPCHQSASLILKKPSTSLAERRGSLSKSLKLPLMNDKTLVMNRSSTFNATREDGAVMNGSTSHLHQSNSIENSSDLNNHVKGRVLDSTQLCEADSVDYSKASFVGNSNDSWVRSSSREDIKSTSSNGMDGSGLLQSNKQNLVYQWPSLEKIVTFGAKHLDSKAAFVIFSSSTSSGKHARNILYFWLGDSFSCAASQVRLDHNREIDCRGGVDWNQVGCDILAHFGLPNDTIIKIIKENEEPEDFLTLLSTL 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0591 708 MobiDBLite consensus disorder prediction 22 69 - -
Lele48g0591 708 CDD DSP 149 240 - -
Lele48g0591 708 MobiDBLite consensus disorder prediction 96 118 - -
Lele48g0591 708 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 140 240 IPR029021 -
Lele48g0591 708 MobiDBLite consensus disorder prediction 368 403 - -
Lele48g0591 708 MobiDBLite consensus disorder prediction 568 588 - -
Lele48g0591 708 SMART dsp_5 148 267 IPR020422 GO:0006470|GO:0008138
Lele48g0591 708 Gene3D Protein tyrosine phosphatase superfamily 133 240 IPR029021 -
Lele48g0591 708 PANTHER MKPA PROTEIN 13 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0591 Lele-ChrLele48 5806368 5811045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0591 8 254 Protein tyrosine phosphatase (PTP) family AT3G55270 53.053 1.02e-75 258