Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0586 ATGATGATATCGAGGGGGCTGTTCGGATGGTCCCCACCCCATATACAGCCGCTCACGCCGGTGTCGGAGGTATCTGAGCCGCCAGAGTCGCCGTCGCCTTACTTAGACCTTGGAGCTGAGACCTCTGCCTCCCACCAGGTTGAAATGGAGGATGAGATCGAGGAACCCGAGGAGATTGAACCACCGCCCGCCGCGGTGCCCTTCTCCAGGCTCTTTGCTTGCGCCGACCGGCTCGATTGGGTTCTGATGGTCGTGGGCTCCCTGGCAGCAGCTGCTCATGGTACTGCTCTCGTAGTTTATTTACACTACTTTGCGAAGATCATTAATGTGTTGAGGATGGATCCTTCGCAAGGTCCGTCGGACGAGCAATTCAACAAGTTCAAGGAGCTTGCTTTAACTGTCGTTTATATCGCTGCGGGTGTTTTTGCTGCTGGTTGGATAGAGGTTTCATGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTTATCAGATCAAAATATGTTCAAGTATTGCTTAATCAAGATATGAGTTTTTTTGATACATATGGGAATAATGGAGATATTGTGAGCCAAGTATTAAGTGATGTGCTGCTCATTCAGTCTGCACTTAGTGAAAAAGTCGGAAATTATATTCACAATATGGCTACGTTCTTCAGTGGACTTGTTATTGGATTTATCAACTGTTGGCAGATTGCATTGATAACATTAGCCACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTTCATAGGCTGGCAGAGAATATTCAAGATGCATATGCTGAAGCTGCTAGTATTGCTGAACAGGCGGTTTCTTATATCAGGACATTGTATGCATTTACAAATGAAACATTGGCTAAGTATTCATATGCGACATCACTTCAAGCTACTCTTAGATATGGTATCTTAATAAGTCTTGTTCAAGGTCTTGGTCTTGGATTTACGTATGGGCTTGCAATATGCTCGTGTGCTTTACAACTCTGGGTAGGAAGGTTCTTGGTTATGCATGACAAAGCTCATGGTGGTGAAATCATAACAGCTCTCTTTGCTGTAATTTTAAGTGGCCTGGGTTTGAATCAGGCAGCAACAAACTTCTACTCATTTGATCAAGGACGTATAGCTGCTTATAGATTGTATGAGATGATAAGCAGGTCATCCTCATCTGTTAATCATGATGGCACTGCCCCCATTTCTGTGCAAGGGAATATAGAGTTTAGGAACGTTTATTTTAGCTATCTATCTCGTCCTGAAATCCCTATATTAAGTGGGTTTTATTTGACTGTTCCTGCTAAGAAAGCTGTGGCACTTGTCGGCAGAAATGGATCTGGAAAAAGCAGTATAATTCCACTCATGGAGCGGTTTTATGATCCCACATTAGGGGAGGTTCTTTTAGATGGGGAGAACATTAAGAATCTGAAACTGGAATGGCTAAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTCAGCTTGAGTATAAGAGACAACATTGCTTATGGTCGGGATGCCACTATGGATCAAATTGAAGAGGCTGCCAAGATAGCCCATGCACATACATTCATCAGCTCATTAGGGAAAGGTTACGACACACAGGTTGGAAGGGCTGGCTTAGCCTTGACAGAAGAACAGAAGATAAAGCTTTCCATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTCTTCTTGATGAGGTAACTGGTGGCCTTGACTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTTTGGATCTTCTAATGTTGGGGCGCTCGACAATAATAATTGCTCGAAGGCTTAGTCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAGTTATTGACCTTGGATGGCTTATATGCAGAGCTCCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAGCTTTCCAAATTGAGAAGGATTCACCCTCAAGTCATAGCTTTAAAGAACCATCATCCCCAAAAATGATGAAGTCACCTTCCCTTCAAAGAGTTTCTAATGTATTTCGGTCTTCAGATGGCATCTATAACTCACAGGAATCACCAAATGTTCGGAGCCCACCACCAGAAAAGATGAATGGTCAGTCTATGGATGCTGCAGATAAGGAGCCTTCAATAAGAAGGCAGGACAGTTTTGAAATGAGGCTACCAGAGTTGCCCAAAATTGATGTTCAGTCTGCGCATCGAGAAAAATCTAATGGTTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACCTCTGATCCCAAGAATGAGCGCTCCCACTCGCAGACTTTTAGTAGACCCCATAGTGATTCTGATGATTTTTCATTGAAACTGAGAGAAGCAAAAGATACAAAGCATCGAAAACCTCCATCATTTTGGAGACTCGCTAAACTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCCATCTTTGGTTCTTTCAATCCTCTTCTTGCATATGTTATTGGTCTGGTGGTGACAGCTTACTATAGAATTGATGAAGTTCATCACCTCCGGCAGGAGGTAGATAAGTGGTGCTTGATTATTGCCTGCATGGGCATTGTGACAGTTGTTGCCAACTTCTTACAACATTTCTACTTTGGTATTATGGGGGAGAAAATGACTGAAAGAGTTAGGAGAATGATGTTCTCGGCCATGCTACGCAATGAAGTTGGTTGGTTTGATGAAGAGGAAAACAGTGCTGACAATTTATCCATGCGTTTGGCCAATGATGCTACATTTGTACGAGCTGCTTTTAGCAACCGTCTTTCCATATTTATACAGGACAGTGCTGCAGTTATTGTTGCTGTTCTTATTGGTGCATTGCTGCACTGGCGATTAGCACTTGTGGCATTAGCAACATTTCCCATTCTCTGTGTTTCTGCAGTTGCCCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGACGCAGTTAGAAATATTTACACTGTTGTAGCATTTTGTGCTGGCAATAAGGTAATGGAACTCTATAGGCTGCAGCTGAAGAAAATATTTAAGCAGAGCTTTTTGCATGGGGTGGCCATTGGTTTTGCATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTTTGCTTTGGTACACTGCCATATGCATAAAAAACAGTTATATGGATCCGCCTACTGCTCTCAAGGAATATATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTTAAACGGCGTAAATCTCTCATTTCAGTGTTTGAAATTATAGACCGTGTACCTAAAATTGACCCTGATGATAACTCAGCATTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCTTCTCGTCCTGAAGTTTTGGTATTGAGTAATTTCAGTCTCAAAGTCAATGGGGGCCAAACAGTTGCAGTTGTTGGAGTTTCGGGGTCAGGAAAGAGCACTATAATATCTTTGATTGAGAGATTTTATGATCCAGTGGCTGGTCAAGTTTTACTAGATGGGAGGGATTTGAAGCTATATAATATGAGATGGTTGAGGAGCCACCTTGGTTTGGTTCAGCAGGAACCTATTATTTTCTCAACTACCATAAGGGAAAATATCATATATGCAAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCCGCAAGAATAGCAAATGCTCACCATTTTATAAGCAGTTTGCCCCATGGTTATGATACTCATGTTGGAATGAGAGGTGTCGACTTGACGCCTGGACAGAAACAGAGAATTGCTATAGCAAGGGTAGTGCTAAAGAATGCACCTATTTTGTTGTTGGATGAAGCTAGTTCATCAATTGAATCGGAGTCAAGCCGAGTGGTGCAAGAAGCTCTGGACACTCTTATAATGGGAAACAAGACCACCATCCTAATAGCACATAGGGCTGCAATGATGAGGCACGTCGATAACATTGTTGTGCTAAATGGAGGACGAATAGTAGAGGAAGGAAGCCATGATTCATTGGTGGCAAAAAATGGCCTGTATGTCCGATTGATGCAACCTCACTTTGGAAAGGCATTGCGTCAGCATCGACTTCTTTAG 4206 0.4287 MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDLGAETSASHQVEMEDEIEEPEEIEPPPAAVPFSRLFACADRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIINVLRMDPSQGPSDEQFNKFKELALTVVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHDKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSSVNHDGTAPISVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLGKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSPSSHSFKEPSSPKMMKSPSLQRVSNVFRSSDGIYNSQESPNVRSPPPEKMNGQSMDAADKEPSIRRQDSFEMRLPELPKIDVQSAHREKSNGSDPESPVSPLLTSDPKNERSHSQTFSRPHSDSDDFSLKLREAKDTKHRKPPSFWRLAKLSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDEVHHLRQEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVLIGALLHWRLALVALATFPILCVSAVAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGVAIGFAFGFSQFLLFACNALLLWYTAICIKNSYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNSALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNMRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKALRQHRLL 1401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0586 1401 Pfam ABC transporter 428 572 IPR003439 GO:0005524
Lele48g0586 1401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 641 IPR027417 -
Lele48g0586 1401 CDD ABC_6TM_Pgp_ABCB1_D2_like 818 1135 - -
Lele48g0586 1401 MobiDBLite consensus disorder prediction 700 731 - -
Lele48g0586 1401 MobiDBLite consensus disorder prediction 744 762 - -
Lele48g0586 1401 Gene3D ABC transporter type 1, transmembrane domain 70 659 IPR036640 GO:0005524|GO:0016020
Lele48g0586 1401 MobiDBLite consensus disorder prediction 781 795 - -
Lele48g0586 1401 FunFam ABC transporter B family member 6 769 997 - -
Lele48g0586 1401 Gene3D - 1150 1389 IPR027417 -
Lele48g0586 1401 SUPERFAMILY ABC transporter transmembrane region 812 1137 IPR036640 GO:0005524|GO:0016020
Lele48g0586 1401 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1152 1389 IPR003439 GO:0005524
Lele48g0586 1401 FunFam ABC transporter B family member 20 70 410 - -
Lele48g0586 1401 Coils Coil 253 273 - -
Lele48g0586 1401 PANTHER ABC TRANSPORTER B FAMILY 51 840 - -
Lele48g0586 1401 MobiDBLite consensus disorder prediction 763 780 - -
Lele48g0586 1401 MobiDBLite consensus disorder prediction 662 688 - -
Lele48g0586 1401 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 829 1121 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele48g0586 1401 SMART AAA_5 1179 1366 IPR003593 -
Lele48g0586 1401 SMART AAA_5 434 613 IPR003593 -
Lele48g0586 1401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1141 1388 IPR027417 -
Lele48g0586 1401 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 407 642 IPR003439 GO:0005524
Lele48g0586 1401 FunFam ABC transporter B family member 20 397 644 - -
Lele48g0586 1401 SUPERFAMILY ABC transporter transmembrane region 71 382 IPR036640 GO:0005524|GO:0016020
Lele48g0586 1401 MobiDBLite consensus disorder prediction 744 795 - -
Lele48g0586 1401 FunFam ABC transporter B family member 20 1142 1391 - -
Lele48g0586 1401 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 374 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele48g0586 1401 Gene3D ABC transporter type 1, transmembrane domain 1006 1149 IPR036640 GO:0005524|GO:0016020
Lele48g0586 1401 Gene3D ABC transporter type 1, transmembrane domain 771 993 IPR036640 GO:0005524|GO:0016020
Lele48g0586 1401 MobiDBLite consensus disorder prediction 665 688 - -
Lele48g0586 1401 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 382 - -
Lele48g0586 1401 Pfam ABC transporter transmembrane region 85 357 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele48g0586 1401 Pfam ABC transporter transmembrane region 834 1098 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele48g0586 1401 MobiDBLite consensus disorder prediction 700 717 - -
Lele48g0586 1401 Pfam ABC transporter 1170 1318 IPR003439 GO:0005524
Lele48g0586 1401 Gene3D - 397 644 IPR027417 -
Lele48g0586 1401 FunFam ABC transporter B family member 6 999 1149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0586 Lele-ChrLele48 5738766 5755170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0586 53 700 Calmodulin-binding Proteins AT2G36910 44.681 8.96e-169 538