Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0578 ATGTCTTTCCAGCATAAAAGCTTTTGGATGCCAAGGGATGCAGGATGCCTAGCTGATGAAAATATGGAATATGAGAATTCTTCCAGAATTGAACCAAAGCGTGGTCATCAATGGTTTGTGGAAACAGGTGAACCTGAAATTGTCAGCAACAATAAGAAGCAAGCTATTGAAGCTGTCGGTGGTAGGCCAGTTTCAGGGGTTTCACATTTGGATGTTTCTCATTGGGATAACAACCCTGGGTTTCACTCAGTTACAGGGCAATTCTCTGACCGTATCTTTGGATCTGAGCCTGTAAAGACTTTCAATTTGGTTGATAAGAACATGCCATCAATGGGAAGTGGAAATCTGAATATGGGAAGGAAGGATTTTGAGAGCAATTATGGAAATGATCCATCAGTGGGGCTGTCAATGTCTCATACTATTGAGGACCCTTCATCTTGTATCAATTTCGGTGGTATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATACTAACAATTGCATGTCTGCATCTATGGGGCACTCCTATAGTAGGGCCAATGATAGTGCAATTTCGGTGGTTGCTGGCTACAATAAGAATGATGGGAATATATCATTAGGTCAGACTTACAACAACGTAAATGAGAATATTGTCTCTGCGGGCACTGCAACAACTAAGGCCGATGACAATCTTGGTTCAGTGGGTCATGCATTCAATAAAGATGGAAGTTTTTTGATGATGGGTCACACTTATGGCAAGGGAGATGAAAGCGTCTTATCGATGGGTCAGCCCTTCGACAGGGGAGATGGAAATTTCATATCAATAGGTCAGTCATATGAAAAGGAAGATGACAATTTGATATCACTGGGCAACTCATATAACAAGGGGCATGAAAACTTCATGCCAATGGGCCCAACCTACAGTAAATCCGGAGAAAATTTCATTTCAATTGCTCCTTCCTATGACAAGGGAACTGATCATATCATGTCAGTGGGTCCTACATTTGACAAGGTGAATTCAAACATGGTATCAACAAACGCTTCATATGATAAAGGAGATTCCAACTCTTTGCCAGTGGGTCATAGCTACAATAAGAATGAGGGCTGTACCATATCTTTTGGAGGCTTTAATGATGATCCAGAGCCAAATCCCTCAGGTGGGATCATTAGTGGCTATGATTTGTTGATGGGCAACCAGAACTCAGCTCATGGTTTGGTTGGCCAGAAGGATCTGGTTGACTCAAGCCCTGATCCAGTTGTAAATAGCAATCCAAAATCTAATTCTAAAACTGATAATGTCATTAAGAGTAAGGAACCAAAGACAAGGAGGGTTCCTTCTAATAACTTCCCTTCAAATGTCAAAAGTCTGTTATCAACTGGAATTTTTGATGGTGTTCCCGTAAACTATGTTTCTTGGTCACGGGAGAAACATCTTAAAGGAGTCATAAAAGGGACTGGGTATTTGTGCTTCTGTAATGAATGCAAGGAGTCCAAGGCTCTCAACGCGTATGAGTTTGAGCGTCATGCGGGTGCCAAGACCAAACACCCAAATAATCACATTTACTTTGAGAATGGGAAAACCATCTATGCTGCTGTTCAAGAGCTGAAGAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAACTGTTACTGGATCTACCATCAACCAAAAGAATTTCCGAGTCTGGAAAGCTTCATACCAAGCTGCTACTCGGGAGCTTCAACGTATATATGGAAAAGATGAAGTGGTCATCCCAACTTAA 1743 0.4131 MSFQHKSFWMPRDAGCLADENMEYENSSRIEPKRGHQWFVETGEPEIVSNNKKQAIEAVGGRPVSGVSHLDVSHWDNNPGFHSVTGQFSDRIFGSEPVKTFNLVDKNMPSMGSGNLNMGRKDFESNYGNDPSVGLSMSHTIEDPSSCINFGGIRKVKVNQVRDTNNCMSASMGHSYSRANDSAISVVAGYNKNDGNISLGQTYNNVNENIVSAGTATTKADDNLGSVGHAFNKDGSFLMMGHTYGKGDESVLSMGQPFDRGDGNFISIGQSYEKEDDNLISLGNSYNKGHENFMPMGPTYSKSGENFISIAPSYDKGTDHIMSVGPTFDKVNSNMVSTNASYDKGDSNSLPVGHSYNKNEGCTISFGGFNDDPEPNPSGGIISGYDLLMGNQNSAHGLVGQKDLVDSSPDPVVNSNPKSNSKTDNVIKSKEPKTRRVPSNNFPSNVKSLLSTGIFDGVPVNYVSWSREKHLKGVIKGTGYLCFCNECKESKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAAVQELKNTPQEMLFDAIQTVTGSTINQKNFRVWKASYQAATRELQRIYGKDEVVIPT 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0578 580 MobiDBLite consensus disorder prediction 408 423 - -
Lele48g0578 580 Pfam Tify domain binding domain 473 527 IPR032308 -
Lele48g0578 580 PANTHER AUTOIMMUNE REGULATOR 8 530 - -
Lele48g0578 580 MobiDBLite consensus disorder prediction 401 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0578 Lele-ChrLele48 5638298 5644984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0578 435 561 PHD Transcription Factor Family AT3G53680 52.756 4.38e-39 151