Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0576 ATGGCTTCATATATCAAATCTCTGATTCTTGTGGTAGCAATACTTATTGTTGCAATAATGCCCAAAGGAAGCGATTCCAATCCTTTTAAAGCAAAAGTGCAAATCATTAATAAGTTAATTGCAGAGCAAGATTTGACCGTTCATTGCAAAGATAAGGATCATGATCTTGGGAAGCAAACCATTGAATATGAGAAAATGTTTGAGTTCACTGTGCATGTAAATGTGTTTCTCCCTGTTGTTTTGTACTTCTGCTCGTTTCAGTGGTATGGACTAGACAAGGCTGTTTACTTTGACATTTACAAACAGACAAGAGACTACAAATGCAATGTGTGTTCTTGGGAGATAAATGATTCTGGTCCTTGCAAAGACGGCGATTGTTATCCTTGGAATCCTTCTCTTCTTGGTGGTGTTTTACTGAATGGAACCAACATTTCTCAATTTCATTGA 447 0.3691 MASYIKSLILVVAILIVAIMPKGSDSNPFKAKVQIINKLIAEQDLTVHCKDKDHDLGKQTIEYEKMFEFTVHVNVFLPVVLYFCSFQWYGLDKAVYFDIYKQTRDYKCNVCSWEINDSGPCKDGDCYPWNPSLLGGVLLNGTNISQFH 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0576 148 Pfam Plant self-incompatibility protein S1 32 122 IPR010264 -
Lele48g0576 148 PANTHER - 30 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0576 Lele-ChrLele48 5615881 5616327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0576 17 134 Carbohydrate Esterase AT3G16970 35.115 2.73e-16 69.3