Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0563 ATGGTCGACCATACTGTTGATAGCCTCTTATATGTTGCAACTTCCAACTTCTCAGGTTTATTCTCCCAAAACTTCATTGTCCTGAAAGAGAAGAGAATGGGTGATAGGTTGAAACAGAAACTTGCCATTGGAATTGATCTTGGAACCACATACTCATGTGTTGCAATATGGCAGCATGGTCGAGCAGAGATCATTGTTAATGATCAAGGGAACAGAACGACGCCGTCTTATGTTGCCTTCACCGATAGTCAAAGAATGGTTGGTGATGCTGCCAAAAATCTGGCTGCACATAACCCTGCTAACACTGTCTTTGATGCAAAGAGATTGATTGGTCGAAGATTTGATGATTCCCATGTTCAAAGTGATATAAACCTTTGGCCATTTAAGGTCATTTGTGGTAAAAATGATAAGCCCAAAATTGTTGTAAATTTTAAATCCCAAGAAAAGCAGTTTCTACCTGAAGAAATCTCATCCATGGTATTAGCAAAGATGCGTGAGATTGCAGAGACATATCTTGGTTCAAAAGTTGAGAATGCAGTTGTCACTGTGCCTGCATATTTCAATGACTCTCAACGTCAAGCAACCAAAGATGCAGGGACAATTGCTGGCCTTAACGTGATGCGAGTAATCAATGAGCCAACTGCTGCAGCAATTGCTTATGGTCTTGACAAGAAAGATAGCTATGACCAAGAGAGAAACATATTTGTTTTTGATCTTGGTGGCGGTACCTTTGATGTTTCTCTTGTCACAATAAAGAAGGGTGACTTTAAAGTTAAAGCAGTTGATGGAGACACTCACCTTGGGGGAGAGGACTTTGACAATAGAATGGTCAACTACTTTGTGGAAGAGTTGAAGAGGAAGTATAAGAAGGACATTAGTGGGAGTCCAAAGGCCCTTAGGAGGTTGAGAACTGCTTGTGAGAGGGCAAAACGAGCACTCTCATCTGCATCCATTGTCGATACAATAGTTGAGGTTGATGCTTTATACGAGGGCTTTGACTTTTGTTCAACTATCACCCGTGCTAGGTTTGAGGAATTGAACAAAGACCTCTTCCAAAAGTGTTTGGAAATTACAGAGAAGTGTCTCATGGATGCTAAGATGGACAAGAGCAAGATTGATGAAGTTGTCCTTGTTGGTGGCTCTACTAGAATTCCTAAAGTTCAACAGCTATTACAGCACTTCTTAAATGGTAAGTATCTATGCAGGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCCATATTAAGTGGGCGAGGAAATGAAGATTTACAGGGCATTGTCTTGAGAGATGTTACCCCATTGTCCTTAGGGTTTGAGAAACACGGTGGTACCATGCAAGTAGTAATTCCAAGGAACTCTACTATTCCTACAAAGATGTGGGTTGATAATTTTACTACTGTGAGGGACAACCAAACAACAGCCTCTTTTCTTGTTTTTCAGGGTGAGAGAGCAAAGGCAAATGATAACAATTTGCTCGATTCATTTAACCTAACCACTCCCCCAGAGCCTAAGGGTATTCCTAAGTTCAAAGTTTGCTTTTCCATTGATGAGAATGGGATCTTAAATGTCTCTGCCAGGGAAACTAGAACTGGGAACGAGAATGGGATAACAATAACCAATAGAGAAGGAAGACTATCAAAAGAAGAGATTGAACGGATGGTTCAAGAAGCTGAGAAATACAAGGCTGATGATGAGAGGTACAAGAAGAAAGTTGAAGCAAAGAATGCTTTGGAGGACTATATATATAAAATCAAGAATGCTGTGCATAATCAGGTGGTTGATTCAAAGCTTTCAGATGCAGACAAGAAGAAGATTGAGGATGCAATTGAAAGAGCCTCCAAGCTGGTTGATGACCAACAGCTTGCTGAAGTTGATGAGTATGAGCGTGAGATGACAGAGCTCAAGAGAGCCAAGATCATATGA 1941 0.4106 MVDHTVDSLLYVATSNFSGLFSQNFIVLKEKRMGDRLKQKLAIGIDLGTTYSCVAIWQHGRAEIIVNDQGNRTTPSYVAFTDSQRMVGDAAKNLAAHNPANTVFDAKRLIGRRFDDSHVQSDINLWPFKVICGKNDKPKIVVNFKSQEKQFLPEEISSMVLAKMREIAETYLGSKVENAVVTVPAYFNDSQRQATKDAGTIAGLNVMRVINEPTAAAIAYGLDKKDSYDQERNIFVFDLGGGTFDVSLVTIKKGDFKVKAVDGDTHLGGEDFDNRMVNYFVEELKRKYKKDISGSPKALRRLRTACERAKRALSSASIVDTIVEVDALYEGFDFCSTITRARFEELNKDLFQKCLEITEKCLMDAKMDKSKIDEVVLVGGSTRIPKVQQLLQHFLNGKYLCRSINPDEAVAYGAAVQAAILSGRGNEDLQGIVLRDVTPLSLGFEKHGGTMQVVIPRNSTIPTKMWVDNFTTVRDNQTTASFLVFQGERAKANDNNLLDSFNLTTPPEPKGIPKFKVCFSIDENGILNVSARETRTGNENGITITNREGRLSKEEIERMVQEAEKYKADDERYKKKVEAKNALEDYIYKIKNAVHNQVVDSKLSDADKKKIEDAIERASKLVDDQQLAEVDEYEREMTELKRAKII 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0563 646 ProSitePatterns Heat shock hsp70 proteins family signature 2. 236 249 IPR018181 -
Lele48g0563 646 Pfam Hsp70 protein 42 642 IPR013126 GO:0005524|GO:0140662
Lele48g0563 646 ProSitePatterns Heat shock hsp70 proteins family signature 1. 45 52 IPR018181 -
Lele48g0563 646 Gene3D Actin; Chain A, domain 4 269 353 - -
Lele48g0563 646 FunFam heat shock 70 kDa protein-like 104 159 - -
Lele48g0563 646 FunFam Heat shock 70 kDa 268 353 - -
Lele48g0563 646 Gene3D - 225 401 - -
Lele48g0563 646 Coils Coil 556 576 - -
Lele48g0563 646 ProSitePatterns Heat shock hsp70 proteins family signature 3. 375 389 IPR018181 -
Lele48g0563 646 PANTHER HEAT SHOCK PROTEIN 70KDA 42 617 IPR013126 GO:0005524|GO:0140662
Lele48g0563 646 SUPERFAMILY Actin-like ATPase domain 229 423 IPR043129 -
Lele48g0563 646 Coils Coil 608 643 - -
Lele48g0563 646 PRINTS 70kDa heat shock protein signature 69 81 - -
Lele48g0563 646 PRINTS 70kDa heat shock protein signature 179 199 - -
Lele48g0563 646 PRINTS 70kDa heat shock protein signature 242 252 - -
Lele48g0563 646 PRINTS 70kDa heat shock protein signature 404 424 - -
Lele48g0563 646 PRINTS 70kDa heat shock protein signature 512 528 - -
Lele48g0563 646 PRINTS 70kDa heat shock protein signature 431 450 - -
Lele48g0563 646 PRINTS 70kDa heat shock protein signature 372 388 - -
Lele48g0563 646 PRINTS 70kDa heat shock protein signature 91 99 - -
Lele48g0563 646 PRINTS 70kDa heat shock protein signature 41 54 - -
Lele48g0563 646 FunFam Heat shock protein 70 43 235 - -
Lele48g0563 646 FunFam Heat shock 70 kDa protein 425 580 - -
Lele48g0563 646 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 426 579 IPR029047 -
Lele48g0563 646 Gene3D - 580 646 IPR029048 -
Lele48g0563 646 Gene3D - 43 419 - -
Lele48g0563 646 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 578 642 IPR029048 -
Lele48g0563 646 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 427 584 IPR029047 -
Lele48g0563 646 SUPERFAMILY Actin-like ATPase domain 41 224 IPR043129 -
Lele48g0563 646 Gene3D - 104 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0563 Lele-ChrLele48 5448277 5452194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0563 42 641 Calmodulin-binding Proteins AT3G12580 70.216 0.0 866