Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0517 ATGTACACTTCAAGAAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAATTTGAGGAGACAGTTGCACAGTACCTATTTGATCTTGAGAACACGAATCAGGAGCTGAAAAGTGACCTGAAGGATCTCTACATAAATCAAGCAATTCAAATGGATGTTGCTGGGAATCGCAAAGCTGTTGTTATCTATGTGCCTTACAGATTGAGGAAGGCATTCCGCAAGATTCATCTCAGACTTGTGAGAGAATTGGAAAAGAAATTCAGTGGAAAGGATGTTGTCGTGATTGCTACAAGAAGGATTGTGCGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGACCTCGCACCCGTACCCTAACAGCTGTCCATGATGCCATACTGGAGGATGTTGTGCATCCTGCTGAGATTGTCGGCAAGCGAGTCAGATACAGGGTCGATGGATCAAAAATAATGAAGGTATTCTTGGACCCTAAGGAGCGCAACAATACCGAATACAAGCTAGAAACTTTTTCTGGAGTTTACAGGAAGCTTACAGGAAAAGATGTAGTATTTGAGTATCCAATCACTGAAGCCTGA 576 0.4306 MYTSRKKIHKDNDAEPTEFEETVAQYLFDLENTNQELKSDLKDLYINQAIQMDVAGNRKAVVIYVPYRLRKAFRKIHLRLVRELEKKFSGKDVVVIATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVHPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFEYPITEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0517 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele48g0517 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele48g0517 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele48g0517 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0517 Lele-ChrLele48 4951252 4952184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0517 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 80.628 5.72e-116 325