Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0488 ATGATGAACGCCGCCTTTTTCCATCATGATTATCTTTCTTCTCTCCCCTTCATACCCACTTTAATCCCAGAACCAGTATTAACCAATCATCTCGCTGCTGCGCCCTCAGACTATGGTTGTGTGGTCGGGAAACAGCAGAACATTGCTCCCGATTGTAATGTCGTTTCTGGTAATTTCATCGCCAAGAAGCCTTCTAAGAAGGATAGGCACAGCAAGATTTACACATCTCATGGTCTCAGAGATCGACGAGTTAGATTATCCATTGAGATCGCTCGCAAGTTCTTCGATCTGCAAGACATGTTAGGGTTCGACAAAGCCAGTAATACTCTCGACTGGCTCTTCACCAAGTCCAAGAAAGCAATTCAAGAGCTCGAAGTTGCAGCTGGAAGCAAGAAGAAAAGCAACAGAAGAAACAGCAAAACAAACACCACCATCACCAAGAGCTTCTCTTCCTCCTCTGAGGAGTACTGTGAAGAAGTGGTTTCACCACAGAGGGCGGTGGATTCAGATTCCGGCAAGCCGACGACAAGGTCAGAGAGGGAGAGGGTGAAGAAGGAGTCGAGGGCGAGGGCGAGGGCGAGGGCGAGGGAAAGGGCTAATCACAAGGGAAAGAGCTTAATGGAAGAGTCTAAAGAAACTGAAGATTGTACTACTATAATCAAAAGGAAGATGATGAAGCAGAAGCCTTGTAATCTGATGAATTCTAATCATCCCCAAAACCATCTTGTGATCCCTAATCACAAGGAATTAGCAAGTTTCGCCACCAACAACAACAACACCATCATTAATACTAGTTATGACTACTCAATATTCCCTAATTTGACTCCAAATTGGGACATTAGTGGCCGCTCCAATTTCTGTGCTATAGCCAATATGAATCTGTCCACAGATCCTCAAATCTATGGGAAATCTTGGGAAGAGTGCAACAATCAGCGTCAACATTAG 945 0.4487 MMNAAFFHHDYLSSLPFIPTLIPEPVLTNHLAAAPSDYGCVVGKQQNIAPDCNVVSGNFIAKKPSKKDRHSKIYTSHGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIQELEVAAGSKKKSNRRNSKTNTTITKSFSSSSEEYCEEVVSPQRAVDSDSGKPTTRSERERVKKESRARARARARERANHKGKSLMEESKETEDCTTIIKRKMMKQKPCNLMNSNHPQNHLVIPNHKELASFATNNNNTIINTSYDYSIFPNLTPNWDISGRSNFCAIANMNLSTDPQIYGKSWEECNNQRQH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0488 314 Pfam TCP family transcription factor 65 203 IPR017887 -
Lele48g0488 314 ProSiteProfiles R domain profile. 185 202 IPR017888 -
Lele48g0488 314 MobiDBLite consensus disorder prediction 160 210 - -
Lele48g0488 314 MobiDBLite consensus disorder prediction 127 148 - -
Lele48g0488 314 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 60 246 IPR005333 GO:0003700
Lele48g0488 314 ProSiteProfiles TCP domain profile. 66 124 IPR017887 -
Lele48g0488 314 MobiDBLite consensus disorder prediction 172 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0488 Lele-ChrLele48 4574743 4575950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0488 62 124 TCP Transcription Factor Family AT1G67260 77.778 1.38e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele48g0488 TCP 4.2e-39 No_clan