Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0479 ATGGGGCGGATCAAGCTGCTCTTCCTCATTCTATTAGTTGCAGCAGCCGCCATGGCAGAAGTAGAATTTCATCAATTCCTTGAAGGTTGTCCCCAGAAATGTGGAGACATAGAGATTCCATATCCATTTGGTGTGGGACAACAAACTGGTACTGCTCACAACTGTTTCTTGGATGAGACATTTAAGGTCACCTGCGACAAGTCGGCATCTAAATTACTCTACAGAGACGACATCCAAATTTCTAGCATATCCCCACAAGTAAGTCAAATGGAAATTCTCATGAATGTCTCTAAGGTTTGCCAAAATGGCTCAAGAATCGCAACAGCTCCGGAACAATCTCTTCGAACCGATGATTATTTCACTATTTCCAACAAGCAAAACAAGTTCGTAACCATTGGTTGCGACACTTTGAGCTTATATTCGACCTCGAATAGCTTTCGAAACGATAGTTATTACAGCGGCTGCTTAACGCTATGTGATAAGCCTCCTCCTCAAGAGTCGAATGATAAAAATTGTTCAGGAACTGGATGTTGTCAGGTGGATATTCCTGCTGGAATGAATAGTATCAATTTTACGGTATTAATGACTAACCTTACCAACGCGTCGAGTTTCAATAATTGCAGTTATGCTTTTGTTGCAAAACACGACTGGTTCAAATTCTCGCTTGGTGATCTTTATTACTTTCCAAATGAGACGGCCCCTCTTGTCCTTGATTGGTCGGTTTCAAATCATACCTGTCAAAAAGGTTCGAGTTCGAGGGATGATCACTGCGCCTGCAGCAAAAACAACACAGATCTTGTTCCCTCTAACAATGATGGGTACAAATGCAAATGCAAAACTGGTTTTGAGGGAAATCCATATCATCCCGATGGATGTCAAGATGTTAATGAGTGCAACGGACCCAACAATAATTGCAGTATTTCAAGGCATGCTCTGTGTCACAATTTCAATGGTGGCTACAGCTGTTCGTGTCCACCTGGATACACAGGCGACGGCTATGTTCAGGGAACACACTGCACTCGATCTCAACCTCGTTTGCTCATTCTTATAATATCATTAAGCAGTGTTGTTTTCTTATTGGTTGTCTTCTCACTAGTTTCCACATCTTGTTGGGTGCACAAGCAAATGACCTTGAAACAAATCAGGCAAAGAAACTTTGAACAAAATGGAGGAAACTTGTTGCAACAACAAATTGCACAACAACAAAGCTACACTGAGAGAACCAAGATATACACAGAAATTGAGCTCAAAAATGCCACAAACAACTTTGACGCAAGTAGAATCCTTGGTCGAGGAGGACAAGGCACAGTTTACAAAGGCATGTTACCAGACAACACACATGTTGCAATTAAAAAGTCCAGAGTTGGAGGAGATCCTCGTCAAATCAAAGATTTCATCAATGAAGTGTTTGTGCTTTCCCAAATAAATCATAGGAATGTGGTCAAAATCTTAGGGTGTTGTCTTGAAACTGAAGTTCCTTTGTTGGTTTATGAGTTTGTGGACCATGGTACTCTATTTGACCACATAGGCTCATTAAAGAATGGACGTTCTATTACATGGGAAACTCGATTAACAATAGCTGCAGAAACTGCGGACGCTATTTCATACTTGCATTCTGCTGCTTCTATTCCAATTATTCACCGTGATATTAAATCTGCCAACATATTATTAGACCACAATGATAGAGCAAAGATTTCTGATTTTGGAGCTTCAAGACTTGTTCCTAATGATGAAACTCAAGTTACAACCGTGGTTCAAGGGACACTGGGATACTTGGATCCAGAGTATCTCCACACAGGTCAGTTGAATGAGAAGAGTGATGTTTATAGCTTTGGGGTTGTGTTCGTGGAGTTACTCACTGGGAATAAAGCGGTTGCATTCAATAATAGGCCAGAACTGAGAAACTTGGCTATGCACTTTGTGTCTTCTGTGAAAGAAAACCGCTTGTGGGAAATTCTTGATGGACGATTGGACCAGAAGAAGAATGCAAAGCAGCTTGAGGATGTAGCCTTATTGGCATCGAGGTGTCTTAGGGTTAATGGAGAAGAAAGGCCCACCATGAAAGAGGTTGCATTGGAGTTACAGAACATTATGATGTCCATGGAAATTCATCCTTGGACCAAGGACAAAGCTATGAAGGAAGAAGAAAGTGAATACTTACTTGGTCATATACCTAATGGATATGGGGATGATGATGCTAGTGCTAGCATTTCAATTGTTCCCAGTAACCATGATAGCATACAGAAGCAGATAGCATTTGGGATTTCAGATGGGCGATGA 2280 0.4118 MGRIKLLFLILLVAAAAMAEVEFHQFLEGCPQKCGDIEIPYPFGVGQQTGTAHNCFLDETFKVTCDKSASKLLYRDDIQISSISPQVSQMEILMNVSKVCQNGSRIATAPEQSLRTDDYFTISNKQNKFVTIGCDTLSLYSTSNSFRNDSYYSGCLTLCDKPPPQESNDKNCSGTGCCQVDIPAGMNSINFTVLMTNLTNASSFNNCSYAFVAKHDWFKFSLGDLYYFPNETAPLVLDWSVSNHTCQKGSSSRDDHCACSKNNTDLVPSNNDGYKCKCKTGFEGNPYHPDGCQDVNECNGPNNNCSISRHALCHNFNGGYSCSCPPGYTGDGYVQGTHCTRSQPRLLILIISLSSVVFLLVVFSLVSTSCWVHKQMTLKQIRQRNFEQNGGNLLQQQIAQQQSYTERTKIYTEIELKNATNNFDASRILGRGGQGTVYKGMLPDNTHVAIKKSRVGGDPRQIKDFINEVFVLSQINHRNVVKILGCCLETEVPLLVYEFVDHGTLFDHIGSLKNGRSITWETRLTIAAETADAISYLHSAASIPIIHRDIKSANILLDHNDRAKISDFGASRLVPNDETQVTTVVQGTLGYLDPEYLHTGQLNEKSDVYSFGVVFVELLTGNKAVAFNNRPELRNLAMHFVSSVKENRLWEILDGRLDQKKNAKQLEDVALLASRCLRVNGEERPTMKEVALELQNIMMSMEIHPWTKDKAMKEEESEYLLGHIPNGYGDDDASASISIVPSNHDSIQKQIAFGISDGR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0479 759 Gene3D Phosphorylase Kinase; domain 1 385 499 - -
Lele48g0479 759 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 698 IPR045274 GO:0007166
Lele48g0479 759 FunFam Wall-associated receptor kinase 2 500 718 - -
Lele48g0479 759 ProSitePatterns Calcium-binding EGF-like domain signature. 294 322 IPR018097 GO:0005509
Lele48g0479 759 SUPERFAMILY EGF/Laminin 293 333 - -
Lele48g0479 759 CDD STKc_IRAK 429 697 - -
Lele48g0479 759 Pfam Protein kinase domain 425 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0479 759 ProSiteProfiles Protein kinase domain profile. 423 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0479 759 Pfam Calcium-binding EGF domain 294 332 IPR001881 GO:0005509
Lele48g0479 759 PIRSF SRK 331 720 IPR024171 GO:0004674
Lele48g0479 759 PIRSF SRK 42 189 IPR024171 GO:0004674
Lele48g0479 759 ProSiteProfiles EGF-like domain profile. 294 340 IPR000742 -
Lele48g0479 759 SMART egf_5 297 340 IPR000742 -
Lele48g0479 759 SMART egf_5 245 293 IPR000742 -
Lele48g0479 759 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 313 324 IPR000152 -
Lele48g0479 759 Pfam Wall-associated receptor kinase galacturonan-binding 30 90 IPR025287 GO:0030247
Lele48g0479 759 SMART serkin_6 423 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0479 759 Gene3D Laminin 242 339 - -
Lele48g0479 759 FunFam Wall-associated receptor kinase 2 393 499 - -
Lele48g0479 759 SUPERFAMILY Protein kinase-like (PK-like) 404 706 IPR011009 -
Lele48g0479 759 Gene3D Transferase(Phosphotransferase) domain 1 500 718 - -
Lele48g0479 759 SMART egfca_6 294 340 IPR001881 GO:0005509
Lele48g0479 759 FunFam Fibrillin 2 289 335 - -
Lele48g0479 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Lele48g0479 759 CDD EGF_CA 294 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0479 Lele-ChrLele48 4243160 4246744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0479 7 759 Receptor kinase-like Gene Family AT1G21250 43.501 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele48g0479 Pkinase 1.9e-49 CL0016