Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0477 ATGCCACTGGCAGTTCTCTCTCTATCTCGTGCTATACCCTCTCCTTCGCGTTTCCAGAGTGGGCGATTGAGAGATATAATGGCCAGGGTAAGAGATAGAACGGAGGATTTTAAAGATGCTGTACGACAGAGTGCTCGCTCTTTGGGGTATGATGAGGCCAAATTGGCATCAGTCATGGCTTCTTTTATTATTCACAAACCTCAGCAAAGGTCACCATTTACTAAAGCTGCATTGAAGACGCTTGAGAGTATTGGAGAATTGGACCAGTTCTTGTTGAAGCACAGAAAGGATTATACAGATCTGCACCGCACAACTGAACAGGAGAGAGATAGCATCGAACATGAAGTTAGTACTTTTATTAAAACTTGCCAACAGCAAATTGATGTTCTCAAAAACAGTATTAATGATGAAGAGGTGAACTCAAAAGGTTGGCTTGGCATTGCAGCTGCAAAGTCTAATGCTGACACTATAGCCCACAAACATGGGGTGGTTCTAATTCTGAGTGAGAGACTCCATTCAGTAACTGCTCAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAATAGAGCTATTCCACGAAGAAAACTTAACCGTATGACCAAAAAGGATTCTGCAGAAGCTTCAAACTCAGGCAATATGGAGCTCAGAGAACCTGAAGAATCACGCAATGAGCCTCTAAGAGTCCAACAGCAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTAGTCTTCTAGATGCAGTTCAAGAGACTGAAACTAAGATGGTGGAAATGTCTGCACTAAATCACTTATTATCTACCCATGTTTTGCAACAAGCTCAGCAAATTGAGCTCCTATACGATCAGGCGGTTGAAGCTACCAAGAACGTGGAGCTTGGTAACAAAGAACTATCCCAAGCCATTCAGCGGAATAACAGCAGCAGGACATTTCTTGTGTTGTTTCTTTTTGTACTCACTTTTTCTGTTCTCTTTCTTGATTGGTACAGCTAA 1008 0.4266 MPLAVLSLSRAIPSPSRFQSGRLRDIMARVRDRTEDFKDAVRQSARSLGYDEAKLASVMASFIIHKPQQRSPFTKAALKTLESIGELDQFLLKHRKDYTDLHRTTEQERDSIEHEVSTFIKTCQQQIDVLKNSINDEEVNSKGWLGIAAAKSNADTIAHKHGVVLILSERLHSVTAQFDQLRAVRFQDAINRAIPRRKLNRMTKKDSAEASNSGNMELREPEESRNEPLRVQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLLSTHVLQQAQQIELLYDQAVEATKNVELGNKELSQAIQRNNSSRTFLVLFLFVLTFSVLFLDWYS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0477 335 FunFam Syntaxin-81 like 238 332 - -
Lele48g0477 335 PANTHER SYNTAXIN-18 27 335 - -
Lele48g0477 335 Pfam SNARE-complex protein Syntaxin-18 N-terminus 32 112 IPR019529 -
Lele48g0477 335 Coils Coil 120 140 - -
Lele48g0477 335 Gene3D - 238 332 - -
Lele48g0477 335 MobiDBLite consensus disorder prediction 200 230 - -
Lele48g0477 335 SUPERFAMILY t-snare proteins 83 299 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0477 Lele-ChrLele48 4222286 4226470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0477 91 335 SNARE and Associated Proteins AT1G51740 74.390 5.44e-116 333