Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0474 ATGGCATCAGCTTCTCCTTCTCCCAATTCTTCTCCCTCTGCAGTGCCACCAACCTCTTCGAATAATACAACACCACCACCTTCTTCACCTTCATCTACAAATTCTTCTAAGACCCCTCCTCCTCCATCTCCTACTAACCCTTCAGCTACACCTCCTTCTCAGGCAGTGCCTTCAACCCCGCCACCTTCTCCGTCTCTTTCGCCTCCGCTGCCATCGCCACCTGCAGCTGCCATAGCCCCTGCTCCAAATTCAACCTCACCAACCCCTCCTAGTTTATCCCCACCACCTCCATTGACTGCTTCACCACCAGATCCTTCACCTCCCGCTGCAGAAAATCCTCCCCCCTCACCTTCGCCAATTCTTCCTCCTCCAGCAAATAACTCAACACCATCATCGCCTGGTAAGCCTTCTCCATCACGGGGAAGGCCACCGGAAAGTACTCCTTCACGCCCTTCACATGCACCACCTCCATCAGCTCCTAAGTCTCCTCCCTCCACAAATGCTGCCCCTCCTTCCAAAACGCCTTCAACCCCTTCAGTCCCTCCTCCAAAGTCTTCGCATGCTCCTCCACACAATGCATCTGCAGCTAACAGGCCCTCTGCATCCCTACCCTCTTTTCCAACAGCGTCGCCTACTGGTAAATCATCCAATCATAGAAATACGTCCACAAACAACATACCTTCACTTCCAGGAGGGTCAAATACTGGACTGGTCACAGTTATTGGCATTATATTTGGCTTTGTTGTTCTCAGCCTTCTTGTTATGGCGATGTGGTTTGTATGGAGGCGGAAGAGAAAGGAAGCAAGATCGAAAGTTGGTTATGCTATGCCTTCCCCTTATGCCTCATCTCCTAGCTCAGGCACAACGGTCTTAAGGCAACAATCTTCCCTTTCTCATAACGGGTATGGTAGTGATTTCGCATATTCACCATCAGATCCAGGTGGACAAAGTGGTTCAAGATGCTGGTTTACATATGAAGAACTTGTCCAAGCAACAAATGGATTTTCAGCACAAAATCTGTTGGGTGAAGGTGGATTTGGTTGTGTCTACAAAGGCTTTCTCATGGATGGAAGAGCAGTAGCTGTGAAACAGCTCAAAGTTGGAGGTGGGCAAGGGGAACGTGAGTTTAGAGCAGAAGTTGAAATTATTAGCCGAGTACATCATCGCCACCTTGTTTCCTTGGTGGGCTACTGTATATCAGAGCATCAGAGATTGCTTGTCTATGACTATGTTCCCAACAATACCCTTCATTACCATCTCCATGGTCAAAACAGGCCAGTTATAGAATGGGCTACAAGAGTGAAGGTTGCAGTTGGTGCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGGGACATAAAGTCATCAAACATCCTCCTTGATAACAACTTTGAAGCTCAAGTTTCCGATTTTGGGCTTGCAAAATTAGCAATGGATTCATTTACACATGTAACCACACGAGTGATGGGGACCTTCGGGTACATGGCACCAGAATATGCAACAAGTGGTAAACTGACTGAAAAGTCGGATGTTTATTCATTCGGGGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCCTCTCAGCCCCCTGGTGATGAGAGCCTGATTGAATGGGCTCGACCTCTATTGAATCAAGTGCTTGAAAATGAAGACTATGATAGATTGGTAGATCCACGACTCGAGAAGAACTATAATAGAAATGAAATGTTTCGGATGATAGAGGCTGCGGCTGCCTGTGTGCGTCATTCTGCAGCAAAAAGACCACGAATGAGTCAGGTCGCTAGAGCTTTGGATGAGATAGATGAGTTTTCATACCTCTGGAATGGAATAAAACCTGGCCACAGTGCAACCTTTAATCCTTCACCACCATCTGCTCAGGTCAGAATGTTTCAAAAGATGGTTTTCGGTGGGGCCAGTCAAAATTTCAGTTCCAGTTTCTTTAACGATTCTCAGAGTAGCTGGAGAAGCAGAGACCAGGAGGACTCAAGACACCATGATCCCCCAAAATGA 2043 0.4743 MASASPSPNSSPSAVPPTSSNNTTPPPSSPSSTNSSKTPPPPSPTNPSATPPSQAVPSTPPPSPSLSPPLPSPPAAAIAPAPNSTSPTPPSLSPPPPLTASPPDPSPPAAENPPPSPSPILPPPANNSTPSSPGKPSPSRGRPPESTPSRPSHAPPPSAPKSPPSTNAAPPSKTPSTPSVPPPKSSHAPPHNASAANRPSASLPSFPTASPTGKSSNHRNTSTNNIPSLPGGSNTGLVTVIGIIFGFVVLSLLVMAMWFVWRRKRKEARSKVGYAMPSPYASSPSSGTTVLRQQSSLSHNGYGSDFAYSPSDPGGQSGSRCWFTYEELVQATNGFSAQNLLGEGGFGCVYKGFLMDGRAVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHGQNRPVIEWATRVKVAVGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAMDSFTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPPGDESLIEWARPLLNQVLENEDYDRLVDPRLEKNYNRNEMFRMIEAAAACVRHSAAKRPRMSQVARALDEIDEFSYLWNGIKPGHSATFNPSPPSAQVRMFQKMVFGGASQNFSSSFFNDSQSSWRSRDQEDSRHHDPPK 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0474 680 FunFam proline-rich receptor-like protein kinase PERK8 411 623 - -
Lele48g0474 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Lele48g0474 680 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 249 654 - -
Lele48g0474 680 FunFam Proline-rich receptor-like protein kinase PERK8 308 410 - -
Lele48g0474 680 Gene3D Transferase(Phosphotransferase) domain 1 411 617 - -
Lele48g0474 680 MobiDBLite consensus disorder prediction 1 18 - -
Lele48g0474 680 SMART serkin_6 335 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0474 680 MobiDBLite consensus disorder prediction 32 188 - -
Lele48g0474 680 CDD STKc_IRAK 341 611 - -
Lele48g0474 680 MobiDBLite consensus disorder prediction 279 294 - -
Lele48g0474 680 Pfam Protein tyrosine and serine/threonine kinase 338 607 IPR001245 GO:0004672|GO:0006468
Lele48g0474 680 ProSiteProfiles Protein kinase domain profile. 335 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0474 680 MobiDBLite consensus disorder prediction 275 294 - -
Lele48g0474 680 PRINTS Proline rich extensin signature 43 60 - -
Lele48g0474 680 PRINTS Proline rich extensin signature 62 87 - -
Lele48g0474 680 PRINTS Proline rich extensin signature 23 39 - -
Lele48g0474 680 PRINTS Proline rich extensin signature 1 18 - -
Lele48g0474 680 MobiDBLite consensus disorder prediction 190 233 - -
Lele48g0474 680 MobiDBLite consensus disorder prediction 665 680 - -
Lele48g0474 680 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Lele48g0474 680 SUPERFAMILY Protein kinase-like (PK-like) 314 608 IPR011009 -
Lele48g0474 680 Gene3D Phosphorylase Kinase; domain 1 315 410 - -
Lele48g0474 680 MobiDBLite consensus disorder prediction 657 680 - -
Lele48g0474 680 MobiDBLite consensus disorder prediction 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0474 Lele-ChrLele48 4202962 4207342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0474 118 670 Trihelix Transcription Factor Family AT5G38560 60.247 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele48g0474 PK_Tyr_Ser-Thr 3.6e-47 CL0016