Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0446 ATGGCGAAAACTAGACCCGGAAGGAAAGACCTGGATTCTTACACTATCAGAGGCACCAACAAGGTCGTTAGAGCTGGAGACTGTGTTTTGATGCGACCTTCCGACACCAGCAAGCCTCCGTACGTTGCGCGAGTGGAGAAGATCGAACTGGACAATAGGAACAACGTTAAAGTTCGTGTAAGGTGGTATTATCGGCCGGAAGAGTCGATTGGGGGACGTAGGCAATTCCATGGAGCTAAAGAGCTGTTTTTGTCGGACCATTATGATGTTCAGAGTGCTCACACCATTGAAGGCAAGTGTATTGTCCACTCTTTCAAGAACTACACCAAGCTCGAACATGTAGGCACTGAAGATTACTATTGTAGATTCGAATACAAGGCTGCTACTGGGGCTTTTACACCTGACCGTGTAGCTGTGTATTGCAAATGCGAGATGCCTTATAACCCAGATGACCTCATGGTGCAATGTGAGGGGTACCATCCTGCTTGTGTGGGCATGACTATCGAAGAAGCAAAGAAACTGGACCATTTTGTCTGTTCTGAATGTTCATCTGATGACGACATTAAAAAGTTGCCCCAAACTACATTTTCTGCATCTCCAGAAGATGATGGCAAGGTGCCAAAGTTAACTTTTGAAGATTTCTACGTTTATTGTGACTTAAGCATCTCATCTGCCAATTCCCAAATGGGGAACCCCCCAAGTCTCTGGTCAAAACACTCTAAAGATCATCCCATTTCCCATTCGTTCTCTTATGTTGACCTCAGAAATTTCTACTGTTTATAG 783 0.4483 MAKTRPGRKDLDSYTIRGTNKVVRAGDCVLMRPSDTSKPPYVARVEKIELDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLEHVGTEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGYHPACVGMTIEEAKKLDHFVCSECSSDDDIKKLPQTTFSASPEDDGKVPKLTFEDFYVYCDLSISSANSQMGNPPSLWSKHSKDHPISHSFSYVDLRNFYCL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0446 260 Pfam BAH domain 23 135 IPR001025 GO:0003682
Lele48g0446 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 198 IPR013083 -
Lele48g0446 260 CDD BAH_BAHCC1 22 156 - -
Lele48g0446 260 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Lele48g0446 260 SUPERFAMILY FYVE/PHD zinc finger 132 188 IPR011011 -
Lele48g0446 260 SMART PHD_3 140 183 IPR001965 -
Lele48g0446 260 FunFam Chromatin remodeling protein EBS 1 132 - -
Lele48g0446 260 PANTHER OS08G0421900 PROTEIN 1 205 - -
Lele48g0446 260 SMART BAH_4 21 136 IPR001025 GO:0003682
Lele48g0446 260 Gene3D - 2 132 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0446 Lele-ChrLele48 3947786 3949970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0446 31 138 Core DNA Replication Machinery Family AT4G14700 29.358 7.31e-09 54.3