Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0442 ATGGCGGCCACTTGTGTGGCTTCTTCTCTGTTTCTGCCAATCGTTTTGATCTTTTCTACTCTTCATCTAGCTTCAGCCAACACTGATGCTACTGACGTTCAAGCTCTTGAGGTTTTGTACAACGCTTTAAACAGCCCTTCTTGGCTAACTGCTTGGAAAATTGGTGGGGGTGATCCCTGTGAAGAGTCTTGGAAAGGGATAACATGTGAGGGCTCAGCCGTTGTTTCCATGTATGAGATGATATTGCAAAACTGTTTGGGACTCAATGGGACTCTCGGATACCTGCTTTCAGACCTTATGTCACTGAGACAACTGAACCTTGCAAGAAATAACTTGAGTGGAAATCTTCCTTATTCCATTTCTGCCATGACTTCCCTCAATTATCTTGATCTATCGTTCAACAACTTTTCTGGAGATCTTCCTCCCTCATTTGATTCATTGTCCAATCTTTCTTCTGCCTTTTTGCAGAACAATCAGTTGACTGGTTCTCTTAGTGTTCTTGTTGGTTTGCCTTTAGATACTTTAAATGTCGCGAACAACAATTTCACAGGATGGATACCTCACGAACTTAGTTCAATTCGTAATTTCATATCTGATGGGAACACCTTTGACAATGGCCCTGCTCCTCCTCCTCCTCCTCCTCCACATACAGCTGCCTCTCCTCCCAGAAGATCTTCCAGTGGCCATCACCATTCTGCATCTGGTTCTCATGAAGCACATGCTTCTAAATCTAACAACGAAGATGCTGATAGCCATAAGGGCTTATCATCTGGGGCTGTGATAGGCGTTATTTTTGGTTCAGTTTGTGTAGCCGTTGTTGCTCTAGTTGCTCTTGCTTTATGTATCCGAAAACATAAAAGGAAGGAAAAAGTGACTCCTCCAATGCAAGAACAGAGGGTAAAAAGTGCTGCTGCTGCTGTTACAGATCTGAAGCCTCCTCCTGCTGAAAAAGTGATAGCTGAGAGGGTTCCTTCGAAGAATGGATCTGCTAGGCGGATAAAATCCCCTATAACTGCTACATCATACACAATTGCTACTCTCCAAAGTGCAACAAATAGCTTCAGTCAAGAATTTATTATCGGTGAAGGTTCTCTTGGTCGAGTTTACAGGGCTGAATTCCCTAATGGGAAGATCATGGCCATTAAGAAGATCGACAATGCAGCGCTGTCATTGCAGGAGGAAGACAACTTTCTTGAAGCTGTATCAAACATGTCACGCTTGCGGCATCCGAACATTGTTACACTAGCTGGATACTGTGCAGAGCACGGGCAGCGCCTTCTAGTTTATGAGTATATTGGTAATGGAAATCTACATGATATGCTCCATTTTGCTGAAGATAGCAGCAAGGCTTTATCTTGGAATGCTCGAGTTCGGATAGCACTTGGCACAGCTAGAGCTTTAGAGTACTTGCATGAAGTATGCTTGCCTTCTATTGTACATAGAAACTTCAAATCGGCAAACATATTACTCGATGAGGAGTTGAATCCTCACCTGTCTGATTGTGGTTTAGCTGCTTTAACGCCAAACACTGAACGACAGGTTTCAACTCAGATGGTTGGCTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCTGGAATCTACACAGTAAAAAGTGATGTTTACAGTTTTGGAGTGGTGATGTTAGAGCTATTGACGGGTCGGAAGCCACTTGACAGTTCACGAGCCAGATCGGAGCAATCACTTGTGAGGTGGGCTACTCCCCAACTTCATGATATAGATGCCTTGGCCAAAATGGTAGATCCTGCTTTGAATGGCATGTATCCTGCAAAGTCACTGTCGCGCTTTGCCGATATCATAGCCCTGTGTGTTCAGCCGGAGCCTGAATTTCGACCTCCGATGTCTGAGGTTGTGCAAGCATTGGTCCGGCTAGTGCAAAGAGCGAGTGTGGTGAAACGCCGCCCGAGTGACGAATCTGGGTTTGGTTACAAAACCCCAGATCATGAAGCCTTTGAGATGTCATTTTAA 1989 0.4439 MAATCVASSLFLPIVLIFSTLHLASANTDATDVQALEVLYNALNSPSWLTAWKIGGGDPCEESWKGITCEGSAVVSMYEMILQNCLGLNGTLGYLLSDLMSLRQLNLARNNLSGNLPYSISAMTSLNYLDLSFNNFSGDLPPSFDSLSNLSSAFLQNNQLTGSLSVLVGLPLDTLNVANNNFTGWIPHELSSIRNFISDGNTFDNGPAPPPPPPPHTAASPPRRSSSGHHHSASGSHEAHASKSNNEDADSHKGLSSGAVIGVIFGSVCVAVVALVALALCIRKHKRKEKVTPPMQEQRVKSAAAAVTDLKPPPAEKVIAERVPSKNGSARRIKSPITATSYTIATLQSATNSFSQEFIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFGYKTPDHEAFEMSF 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0442 662 SUPERFAMILY L domain-like 30 196 - -
Lele48g0442 662 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 320 431 - -
Lele48g0442 662 CDD STKc_IRAK 360 631 - -
Lele48g0442 662 SUPERFAMILY Protein kinase-like (PK-like) 333 628 IPR011009 -
Lele48g0442 662 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 432 642 - -
Lele48g0442 662 Pfam Protein kinase domain 357 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0442 662 MobiDBLite consensus disorder prediction 205 220 - -
Lele48g0442 662 Gene3D Transferase(Phosphotransferase) domain 1 432 650 - -
Lele48g0442 662 ProSiteProfiles Protein kinase domain profile. 354 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0442 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 632 - -
Lele48g0442 662 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lele48g0442 662 MobiDBLite consensus disorder prediction 200 253 - -
Lele48g0442 662 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 119 214 - -
Lele48g0442 662 Gene3D Phosphorylase Kinase; domain 1 317 431 - -
Lele48g0442 662 MobiDBLite consensus disorder prediction 231 250 - -
Lele48g0442 662 Gene3D Ribonuclease Inhibitor 29 209 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0442 Lele-ChrLele48 3915847 3920625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0442 101 662 Strubbelig Receptor Gene Family AT4G22130 70.609 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele48g0442 Pkinase 1.1e-44 CL0016