Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0438 ATGACCATAAAAGCAAACACCAAATTCTTAGTTCGTCTTTTGTTTCTTTTTATGATTCTGATTCTCAGAGTCGAAGCTCACTGTATGTCTGGTTGCAATCTTGCTTTAGCTTCGTACTACATCTGGGAAGGCGCAAATCTCACGTACATAAGCGAAATCTTCGGCCAGGATATTACTGAGATTCTAAAGCACAATCCAACAATCCCCAATCCGGATTATGTTCGGAGCAACACCCGAATCAACGTGCCGTTCACGTGCGATTGCTTGAACGGCGTCTTCTTAGGTCACACTTTCACTTACAAAATCCAGCCCGGCGATACGTACCGTAAAATTGCTCAGGAAGCTTTTTCTAGCCTGACGACCGAGGATTGGTTGGAGAGGGTGAACAGATATGAAGCTACAAACATACCAGTAGCCGTTGGGATTAACGTCACCATCAATTGCTCATGCGGCGATAGGCGTGTGTCGAGGGACTATGGATTGTTTTTGACATACCCACTTCGGAGCGGCGACAAATTATCGGAGCTAGCGGCGGCTGCCGGTGTTACGGCGGAGCTCATACAGAGGTATAATCCCGCCTCCGATATCAACGCGGGGAGTGGACTGGTGTTTGTGCCGGCGAAAGATGAAAAGGGAAGTTTTTTACCTCTACAAAGTAGATCTGGTGAGTGGATACTACGCACCGTTTCGGCACTGAATCATGAAAGAATATCTGGAGGAGCCATTGCTGGAATATGTATTGGAGCAGTTTTTGGGGTCTTACTATTGGCACTTGTTCTGTATCTTGTTCTATATAGAAGCAAGAAGGTGGAAGAGGCTTCCCTTCTTCCTGGGCTATCTCAAGATCAGTATCTTCAAATTGCACACTGTTCAGGAAGCAGCTTGGAGAAGGCTTCAGAACCTGTTGACGTGGCTTCTCCAAGGTTGAATGGAATCACAGTAGACAAGTCAGTAGAGTTCTCATATGAGGAGCTTGCCAAAGCTACCGATGGCTTTTCTATTTCTAATAAGATTGGTCAAGGTGGCTTTGGATCTGTTTACTACGCAGAGCTTCGAAATGAGAAAGCTGCAATTAAGAAGATGGATATGCAAGCTTCAAAAGAATTCCTTGCTGAACTCAAGGTTCTGACACATGTTCACCACTTGAACTTGGTGCGCTTAATAGGATACTGTGTTGAGAGCTCTTTATTTTTGGTCTATGAGTACATTGAGAATGGAAATTTAGGACAACATTTACGTGGGTCAGGAAGAGAACCATTATCATGGTCAACTAGAGTTCAAATTGCCCTTGATGCAGCAAGAGGACTTGAATACATCCATGAACATACAGTTCCTGTCTACATTCATCGCGACATTAAATCAGCAAACATTTTGATTGATAAGAACTTTCGTGCAAAGGTTGCAGATTTTGGTCTGACAAGGCTTACTGAATATGGAAGTTCTTCACTTCATACTCGCCTTGTGGGTACATTTGGCTATATGCCTCCAGAATATGCGCAATACGGCGAAGTTTCGGCCAAAATAGATGTATATGCTTTTGGAGTAGTGCTATATGAACTCATATCTGCTAAAGAAGCTATTGTGAAGACAAACGAGCCTGTGAACGAATCAAGAGGACTTGTTGCCTTGTTTGAAGAGGTTTTAGAGCAGCTAAATGACAAAGAACAGCTTCTTGAACTTGTCGATCCTAGGCTTGGTGCTGACTACCCTTTTGAATCAGTATATAAGGTGGCTCAACTTGCAAAAGCTTGCACACTTGATAATCCACAACTAAGGCCAAGCATGAGATCAATTGTAGTTGCACTTATGACACTTTCTTCTTCAACTGAAGATTGGGATGTTGGCTCCTTTTATGAAACCCAAGCTATGATGCATTTCATGGCTGGAAGATAG 1893 0.4337 MTIKANTKFLVRLLFLFMILILRVEAHCMSGCNLALASYYIWEGANLTYISEIFGQDITEILKHNPTIPNPDYVRSNTRINVPFTCDCLNGVFLGHTFTYKIQPGDTYRKIAQEAFSSLTTEDWLERVNRYEATNIPVAVGINVTINCSCGDRRVSRDYGLFLTYPLRSGDKLSELAAAAGVTAELIQRYNPASDINAGSGLVFVPAKDEKGSFLPLQSRSGEWILRTVSALNHERISGGAIAGICIGAVFGVLLLALVLYLVLYRSKKVEEASLLPGLSQDQYLQIAHCSGSSLEKASEPVDVASPRLNGITVDKSVEFSYEELAKATDGFSISNKIGQGGFGSVYYAELRNEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVESSLFLVYEYIENGNLGQHLRGSGREPLSWSTRVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTRLTEYGSSSLHTRLVGTFGYMPPEYAQYGEVSAKIDVYAFGVVLYELISAKEAIVKTNEPVNESRGLVALFEEVLEQLNDKEQLLELVDPRLGADYPFESVYKVAQLAKACTLDNPQLRPSMRSIVVALMTLSSSTEDWDVGSFYETQAMMHFMAGR 630
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0438 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Lele48g0438 630 Pfam Protein tyrosine and serine/threonine kinase 334 601 IPR001245 GO:0004672|GO:0006468
Lele48g0438 630 SUPERFAMILY Protein kinase-like (PK-like) 311 602 IPR011009 -
Lele48g0438 630 FunFam LysM receptor kinase 2 311 402 - -
Lele48g0438 630 ProSiteProfiles Protein kinase domain profile. 332 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0438 630 SMART serkin_6 332 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0438 630 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 616 IPR044812 GO:0019199|GO:0045087
Lele48g0438 630 Gene3D Phosphorylase Kinase; domain 1 317 402 - -
Lele48g0438 630 FunFam PTI1-like tyrosine-protein kinase 3 403 616 - -
Lele48g0438 630 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Lele48g0438 630 Gene3D Transferase(Phosphotransferase) domain 1 403 621 - -
Lele48g0438 630 CDD STKc_IRAK 338 599 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele48g0438 Lele-ChrLele48 3861734 3869138 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0438 10 630 Receptor kinase-like Gene Family AT3G21630 55.008 0.0 690
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele48g0438 PK_Tyr_Ser-Thr 1.5e-48 CL0016