LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele48g0432	ATGCTTCCTGGTGTGGGACTCGCGGTGAACCTTGGCCGCGTTATGGAATCTTCTGATATTAATAATAATAATCGGAAGGTCCTCGGTGAAGTTGATTTCTTCTCTAACCCAACAAGCAAGTCGTCGTCTTCATCAGCACCACCACCACCACCACATCAAGATGTGAAAACCCTTACAAATATCTCTTTCAAGAAGGATATTCCTCAGACTCTACCAGTTTCTAGGTCTAATTTGGATATGAATATTGGTTTACAACTGCATACTGGTAATAATACCAAGAGTGATCAATCTACGGTAGATGATCATGTCGTGTCGTCAGATGCAGATGATAAGCGAGACAAGAGCAACGAGGTTGTTGGAAAAGGTGGTCAGGAGATAAAACCGGTGGCAGCGAGGCAGTTTCTGGAGCTTGGAGGTCGTATTGGCTGCGAAGCAGCAGAAGCTGATGATGACGAAGTGTCGAATTCGAGTTCAGATGAAAGAACTGAATCTGCTTCACCTGATCAGAAAAACAACAATAATGGTAAAAGTAGTGAGATAATGGGTAGGGAAGAGAGTCCAGCTGATTCAGAGTCACAAAAAGCTTATAAGCTTCAGAAACTGAACCCTTCTTCTAACTCCATTGATCAATCCACCGCTACCACAGAAGCCACCATGAGAAAAGCTCGTGTCTCAGTTCGTGCTAGATCAGAAGCCCCCATGATCAGTGATGGTTGTCAATGGCGAAAATATGGGCAAAAAATGGCTAAAGGAAACCCGTGTCCTCGTGCTTATTACAGATGCACCATGGCTGTTGGTTGTCCTGTTCGCAAACAAGTTCAGCGTTGTGCAGAAGACAGGAGCATATTGGTAACAACATACGAAGGAAATCATAACCATCCGTTGCCTCCGGCAGCCATGGCGATGGCTTCGACGACGAGTGCCGCCGCGGGCATGTTAATGTCTGGTTCAATGTCAAGTCCAGAAGGGTTGATGAAGATGAACCCTAATATGTTAGCCAGAACCATTCTTAACCCTACTGGTTCTCCAACCATGGCTACTCTTTCTGCTACAGCACCTTTCCCTACTGTCACATTGGACCTAACTCACAACGCAATTCAGTTTCAAAGCCCTAATACGCCCCCGTTTCAGCTGGTTCAACCATTGTATAACCAGTCCAAGTTTTCTGGCCTTCACTTGTCACAACAGGATAGGCCAATTCATCAGCAATCTTCCCCCACGGTGGCTGACACCCTCAGTCACGCTGCCACGGCGATTACTGCCGACCCGAACTTCACGGCGGCTCTCGCGGCAGCCATCTCTTCGATCATCCGTGGTAACAATCATCAGAACAACAACGGTGGTGGCAGTAGCAGCAATCCACATGTTCTCAACAGTACTTCAATCAGCAGCTTTTCAGGGGATTAA	1407	0.467	MLPGVGLAVNLGRVMESSDINNNNRKVLGEVDFFSNPTSKSSSSSAPPPPPHQDVKTLTNISFKKDIPQTLPVSRSNLDMNIGLQLHTGNNTKSDQSTVDDHVVSSDADDKRDKSNEVVGKGGQEIKPVAARQFLELGGRIGCEAAEADDDEVSNSSSDERTESASPDQKNNNNGKSSEIMGREESPADSESQKAYKLQKLNPSSNSIDQSTATTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRSILVTTYEGNHNHPLPPAAMAMASTTSAAAGMLMSGSMSSPEGLMKMNPNMLARTILNPTGSPTMATLSATAPFPTVTLDLTHNAIQFQSPNTPPFQLVQPLYNQSKFSGLHLSQQDRPIHQQSSPTVADTLSHAATAITADPNFTAALAAAISSIIRGNNHQNNNGGGSSSNPHVLNSTSISSFSGD	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele48g0432	468	MobiDBLite	consensus disorder prediction	85	124	-	-
	Lele48g0432	468	FunFam	probable WRKY transcription factor 31	220	297	-	-
	Lele48g0432	468	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	109	448	IPR044810	GO:0003700
	Lele48g0432	468	SUPERFAMILY	WRKY DNA-binding domain	228	296	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele48g0432	468	MobiDBLite	consensus disorder prediction	85	99	-	-
	Lele48g0432	468	Pfam	WRKY DNA -binding domain	237	294	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele48g0432	468	MobiDBLite	consensus disorder prediction	33	56	-	-
	Lele48g0432	468	MobiDBLite	consensus disorder prediction	145	217	-	-
	Lele48g0432	468	Gene3D	WRKY domain	220	297	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele48g0432	468	SMART	WRKY_cls	235	295	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele48g0432	468	ProSiteProfiles	WRKY domain profile.	230	296	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele48g0432	468	MobiDBLite	consensus disorder prediction	443	468	-	-
	Lele48g0432	468	MobiDBLite	consensus disorder prediction	100	120	-	-
	Lele48g0432	468	MobiDBLite	consensus disorder prediction	192	217	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele48g0432	Lele-ChrLele48	3799896	3802046	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele48g0432	22	447	WRKY Transcription Factor Family	AT1G62300	47.276	6.76e-113	342

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele48g0432		WRKY	2.8e-24	CL0274