Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0430 ATGGACTGGTCTAGGGGTCCCATCGTCGGCCGGGGTTCCACCGCCACCGTCTCCATTGCCCATGATCGCCGGTCCGGTCACTTGTTCGCTGTCAAGTCGACTGAGCTCGACCGATCGGAGTTGCTTCAGAGGGAACAGAGAATTCTGTCCACGTTGAAATCTCCTCACATTGTAGCATACCATGGTTATGATGTTACATTAGAGAATAATGCAGAATGGTACAATCTGATCATGGAGTATGCGCCTTATGGTACGATTGCCGACATGGCTCGCCGGCGAGATGGGCTAGAAGAAGCGGTGGTTCGAACCTATGCGCGCCAAATCTTGCTGGGGCTCAACCATCTTCATTCTAATGGCATTGTGCATTGTGATATTAAAGGTAAGAATGTTTTGGTGACGGAGGAAGGGGCGAAAATTGCAGACTTGGGTTGTGCTAGGAGGGTGTCTGAGGCGGCGGGTGACGGCGGAATGGTTGCCGGCACACCAATGTTCATGGCGCCGGAGGTGGCGCGTGGGGAACAACAGGGGTTCGCTGCCGACGTGTGGTCTCTGGGGTGTAGTGTATTGGAGATGATCACCGGGCGGGCTCCCTGGCCGGATGTATCTGAGCCGGTAAGTGCGGTTTATCGAATCGGGTTCTCGAGGGATGTGCCGGAGATTCCCGTGTTCATGTCGGATATAGGGAGGGACTTTGTGAGCAAGTGTCTGACGAGAGACCCGATTGAGCGGTGGTCGGTAAGCGAACTCCTCAAACACGAGTTCTTGGAAGAATCAATTTCGTCCATGAAAGAATTTGGAAGCTGGGATACTCCAACGGATGTAATGGACGGATCCATTTGGGATTCGTGGGAGCCCACGCAAGATCCGACCCGTGTTCGTTCTTGCAATTCTGGCAGAGACAGGATTCGTCGGTTGTGCACAGAAGCTACGACGTCGTTTGAGGGCAATGAGCCCAACTGGGAATGCGAAGAAGAGTGGATCACAGTGAGAAGTGGCAACGAGACAAAAGAGAATTACAATGTTGACCTTGGGAATGAGAGAAATTTGGGGCATTGTTATGAACCCAAAACGGTAATTACCGTTGGGTTGTGTCAGTGTGATTTGAATTGTAAGGCTAATGGTTGTAACAAAGGATTATTATTGTTAGGCATGGGGATTCTTGATCCTTTGTGCTACTTTCACTTTGATCTGGTGAAGACAGAGTTCTTACATCACACAGGAGGGAACTACATGTATGCTCCTTGGATTTCTTGGCTTCTCATTCTTCAATCTGCACCCATCAATGTTCCCAGATTTTTCTCAGGTTCTATGCTGGACACTTTCAGTTCCAATATTGGTGCTGGATGTCAAACTCTACGGACAACGGTTAACAGCTGA 1377 0.5004 MDWSRGPIVGRGSTATVSIAHDRRSGHLFAVKSTELDRSELLQREQRILSTLKSPHIVAYHGYDVTLENNAEWYNLIMEYAPYGTIADMARRRDGLEEAVVRTYARQILLGLNHLHSNGIVHCDIKGKNVLVTEEGAKIADLGCARRVSEAAGDGGMVAGTPMFMAPEVARGEQQGFAADVWSLGCSVLEMITGRAPWPDVSEPVSAVYRIGFSRDVPEIPVFMSDIGRDFVSKCLTRDPIERWSVSELLKHEFLEESISSMKEFGSWDTPTDVMDGSIWDSWEPTQDPTRVRSCNSGRDRIRRLCTEATTSFEGNEPNWECEEEWITVRSGNETKENYNVDLGNERNLGHCYEPKTVITVGLCQCDLNCKANGCNKGLLLLGMGILDPLCYFHFDLVKTEFLHHTGGNYMYAPWISWLLILQSAPINVPRFFSGSMLDTFSSNIGAGCQTLRTTVNS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0430 458 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 337 - -
Lele48g0430 458 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Lele48g0430 458 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0430 458 Pfam Protein kinase domain 7 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0430 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Lele48g0430 458 CDD STKc_MAPKKK 2 255 - -
Lele48g0430 458 SUPERFAMILY Protein kinase-like (PK-like) 3 288 IPR011009 -
Lele48g0430 458 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0430 458 Gene3D Transferase(Phosphotransferase) domain 1 2 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0430 Lele-ChrLele48 3776564 3782028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0430 2 336 MAP Kinase Kinase Kinase AT5G55090 46.479 1.56e-98 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele48g0430 Pkinase 6.6e-53 CL0016