Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0410 ATGTATACGTTGCTCTCTCTCTCTCTGCGGTCTCTGAACTCTGATAGTGGCTGTGGCGCAACACCACTGGCCGAGCTTGAAGGAACTTCACCTATGAGTTCAGCGTCCATCATAGTTATATATATACTATGGCTTGCATCAACATTGACACTGTTACATGGAGCATCAAAGGAAGTAGCTTCAAACCCTGAAGTTGTGAATATTGGAGCTATTTTCACATTTAAAACTATAAATGGACGAGTTGCTAAAATTGCTATTGAAGCTGCAGAGAAAGATGTGAATTCCGATCCACACATCCTTGGTGGACGCAAATTGTCCATAACCCTGCACGATTCTAACTTCAATGGTTTTCTTGGCTTCATTGGAGCGCTCAAGTTCTTGGAGAGGAACTCAGTTGCTATTATTGGTCCACAGAGTTCAGTAATGGCCCCTGTGCTCTCGCATTTGGCAAATGAACTCCATGTTCCTCTTCTGTCATTTACAGCTCTGGATCCTACCCTGTCACCTCTGCAGTACCCTTATTTTCTGCAAACAGCGCCTAATGATCAATTCCAGATGACTGCAGTGGCAGACATGATTAGCTATTTTGGTTGGAGAGAAATTATTGCTATTTATAGTGATGATGATCAAAGCCGAAATGGTATTGCTGTATTGGGAGATAAACTTGCTGGAAAGCGCTGTAAGATATCTTACAAAGCACCGCTGCCCCCTGATCCAACTGCTAGTCGGAATGATATTACTATTCAGTTGACCAAGGTTCAAAGTATGGAGTCAAGAGTGATTGTTCTTCACACCTTCTCCAAGACAGGTCTCTTGGTTTTTGATGTGGCTCAAGAATTAGGAATGATGAATGAAGGTTTTGTCTGGATAGCTTCTTCTTGGTTATCAACTGTTTTAGACTCACGGTCACCACTTTCTTTGAATACTTCTAACTCAATCCAAGGAGTTCTTACGCTTGGGCCTCACACCCCACAATCAAAAAGAAAACAGACCTTTATGTCCAGGTGGAACCAGATAAGTAATGGTTCAATTGGGTTGAATCCATATGGACTCTATGCTTATGATTCTGTTTGGATCATTGCCCTTGCATTGAAATCATTTTTTGATCAGAATGGGAATCTTTCATTCTCTAACAATACAAATTTAAACAGTATGAGAGGGGAGACTCTGGATCTTGGTGCACTGAGCGTTTTTAATGGAGGGGAACAATTGCTTGATAACATACTGCGCATTAACACGACTGGATTGACAGGACCTATTCAATTTCGTTCAGATAGATCCCCCTTAAATCCATCATATGACATTCTCAATGTAATTAATGGTAGTTATAGGAAAATCGGGTACTGGTCTAATTATTCTGGGCTATCTGTTATTCCTCCTGAGAAACTTCACACTAAGCGAGCCAACCTGTCAATTTTAAACCAACATCTGTCCAACATAACTTGGCCTGGTGGTACAACAGAAAAGCCTCGGGGATGGATTTTTCCAAATAATGGAAGACAGCTAAGAATTGGTGTCCCCAATCGAGTTAGTTATCAGAACATGGTCTCACAAATAAATAGTACCAATAAAGTTCAAGGGTACTGCATAGATGTCTTCCTGGCTGCTATTAAATTGCTACCTTATGCAGTTCCATATAAATTTGTTCTGTTTGGAGATGGACATGAGAACCCCAACTACTATGACCTTGTCAATAAGATTAATTCTGGTGTGTTTGATGCTGCTGTAGGTGACATTGCCATTGTCACTGACCGAACAAAGATTGTGGATTTTACTCAACCATATATAGGGTCAGGACTTGTTGTGGTCACAAAAGTAAAACAATTAAAGTCAAGTGCTTGGGCTTTCTTGCGACCTTTTACTCCATTAATGTGGGGTGTCACAGCTGTTTTCTTCCTCGCTGTTGGAGCAGTTGTGTGGATTCTTGAACATAGAACAAATGACGAGTTCAGGGGGCCTCCTAGGAAACAAATTGTTACAATTCTTTGGTTTAGCCTCTCCACCATGTTCTTTGCCCACAGAGAAAACACAGTTAGTGCACTTGGTCGTATTGTACTAATCATCTGGCTTTTTGTGGTTTTGGTAATCAATTCAAGCTATACTGCAAGCCTAACATCAATTCTCACTGTGCAACAACTTTCCTCTCCAATAACAGGAATTGATACCTTGATAACTAGTAATGAACGAATAGGATTTCAAGTAGGATCATTTGCTCAAAACTATCTTACTCAGGAACTCAACATCCCAAAATATAGACTTGTTGCTCTCGGTTCGCCGGAAGAATATGCTATCGCTCTCGAGAGGGGAACCGTCGCGGCTGTCATTGATGAACGACCATATGTAGAACTCTTCATGTCAAATCACTGCAAATTCTCCATTAGAGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCCTTCCGAAGGGACTCTCCTTTATCCATTGACATGTCAACTGCCATTATGACTCTGTCTGAAAATGGTGAACTCCAGAAGATTCATGAGAGGTGGCTCTCGACAAGGGCTTGCGATTTTAAGATTACAGAGGAGGGATCTGAGCAACTTAAGTTAGAAAGCTTTTGGGGCCTGTTTATGTTATGTGGGATAGTAATTCTCCTAGCGCTTCTTGTCTATCTCATCTTGATGATTCTCCGATTCTGCCGTGACTTCCCCAGAAATGATGGTCCTTCTAATGGTGGCACCAGCAGCTCATCGCGCATCCAGACATTTCTTAGTTTTGCCGATGAAAAAGAAGACATGTCACAAAGAAAGCTTAAAAGAAAACGCAAGGATTTTTCATAG 2802 0.414 MYTLLSLSLRSLNSDSGCGATPLAELEGTSPMSSASIIVIYILWLASTLTLLHGASKEVASNPEVVNIGAIFTFKTINGRVAKIAIEAAEKDVNSDPHILGGRKLSITLHDSNFNGFLGFIGALKFLERNSVAIIGPQSSVMAPVLSHLANELHVPLLSFTALDPTLSPLQYPYFLQTAPNDQFQMTAVADMISYFGWREIIAIYSDDDQSRNGIAVLGDKLAGKRCKISYKAPLPPDPTASRNDITIQLTKVQSMESRVIVLHTFSKTGLLVFDVAQELGMMNEGFVWIASSWLSTVLDSRSPLSLNTSNSIQGVLTLGPHTPQSKRKQTFMSRWNQISNGSIGLNPYGLYAYDSVWIIALALKSFFDQNGNLSFSNNTNLNSMRGETLDLGALSVFNGGEQLLDNILRINTTGLTGPIQFRSDRSPLNPSYDILNVINGSYRKIGYWSNYSGLSVIPPEKLHTKRANLSILNQHLSNITWPGGTTEKPRGWIFPNNGRQLRIGVPNRVSYQNMVSQINSTNKVQGYCIDVFLAAIKLLPYAVPYKFVLFGDGHENPNYYDLVNKINSGVFDAAVGDIAIVTDRTKIVDFTQPYIGSGLVVVTKVKQLKSSAWAFLRPFTPLMWGVTAVFFLAVGAVVWILEHRTNDEFRGPPRKQIVTILWFSLSTMFFAHRENTVSALGRIVLIIWLFVVLVINSSYTASLTSILTVQQLSSPITGIDTLITSNERIGFQVGSFAQNYLTQELNIPKYRLVALGSPEEYAIALERGTVAAVIDERPYVELFMSNHCKFSIRGQEFTKSGWGFAFRRDSPLSIDMSTAIMTLSENGELQKIHERWLSTRACDFKITEEGSEQLKLESFWGLFMLCGIVILLALLVYLILMILRFCRDFPRNDGPSNGGTSSSSRIQTFLSFADEKEDMSQRKLKRKRKDFS 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0410 933 Gene3D - 181 455 - -
Lele48g0410 933 CDD PBP1_GABAb_receptor_plant 67 459 IPR044440 -
Lele48g0410 933 Gene3D - 613 745 - -
Lele48g0410 933 Gene3D - 802 837 - -
Lele48g0410 933 FunFam Glutamate receptor 181 340 - -
Lele48g0410 933 SMART GluR_14 503 840 IPR001320 GO:0015276|GO:0016020
Lele48g0410 933 Pfam Bacterial extracellular solute-binding proteins, family 3 519 839 IPR001638 -
Lele48g0410 933 CDD GluR_Plant 500 838 - -
Lele48g0410 933 Pfam Ligand-gated ion channel 840 870 IPR001320 GO:0015276|GO:0016020
Lele48g0410 933 Gene3D - 84 430 - -
Lele48g0410 933 SUPERFAMILY Periplasmic binding protein-like II 479 838 - -
Lele48g0410 933 MobiDBLite consensus disorder prediction 912 933 - -
Lele48g0410 933 Gene3D - 772 801 - -
Lele48g0410 933 Gene3D - 497 612 - -
Lele48g0410 933 FunFam Glutamate receptor 613 743 - -
Lele48g0410 933 PIRSF IGluLR_plant 33 933 IPR017103 -
Lele48g0410 933 FunFam Glutamate receptor 739 842 - -
Lele48g0410 933 SUPERFAMILY Periplasmic binding protein-like I 61 493 IPR028082 -
Lele48g0410 933 MobiDBLite consensus disorder prediction 911 933 - -
Lele48g0410 933 FunFam Glutamate receptor 497 613 - -
Lele48g0410 933 Pfam Receptor family ligand binding region 84 439 IPR001828 -
Lele48g0410 933 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 66 906 - -
Lele48g0410 933 SMART AABind_6 501 841 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0410 Lele-ChrLele48 3640090 3645680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0410 53 931 Ion Channels AT2G17260 61.305 0.0 1128