Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0391 ATGGGTTGCTTGTCCTGTTGCATTACCCCGTCTCAGAAAGCCGTCGATACAGATGGTCAAACAGAAGTTTCAAAACGCAGGGCAGACTTCAAATCCTATACATTGAAATCAATTGTTTCAACTATTTCACTCAAGACAGGCAGCAGCAGGACGAGAAGGATAAACGCAGAGATACAGAAACATGGAACTGCAAAAAATGAAGCTAAAGTTTTCACATACAAAGAACTCGGTGATGCAACTGACGGTTTCATTGATGAACACAGAATAGGAGAGGGGGGATTCGGGGTCGTCTACAAAGGACGCATAGAAAGCATTGATCAAGTTGTGGCTGTGAAGCAACTGGACAGACAAGGAAGGCAAGGAACTAGAGAATTTATTTCAGAGGTTTTGATGTTAAGCTTGATGAAGCATAAAAACCTTGTCAATTTGATTGGTTATTGTATTGAAGACGACCACAGGATCTTGACCTACGAATTCATGTCCAATGGGAGTCTAGAAGATCACCTTCTAGACTTGGCTCCAGATAAGGTACCTTTATCTTGGGATAGGAGGGTGAAAATAGCTGAGGGAGCTGCAAGAGGGCTTGAGTATCTACATGAAATTGCTAAGCCAACAGTAATATACCGTGATTTTAAAGCATCAAATATACTGTTAGATGATGATTTCAATCCCAAGCTTTCCGATTTTGGAATGGCTAAGATGGGTCCAGCACAAGGCCAACTTTTTATCAACACAAGGGTCATGGGAACCTATGGATATTGTGCACCAGAGTATGCTGCCACCGGCCAGCTAACGCACAAGTCTGATGTTTATAGCTTTGGGGTTGTGCTTTTGGAGATAATCTCTGGCAGAAGAGTTATTGATGTTACAAGAGCAGCAGACGAGCAGAACCTGATCCAATGGGCACGACCTCTGTTTAAGGAAAGAAGCATGTTTACTCAAATGGCTGACCCCTTGCTTCATGGTAACTATCCTGAAAAGAGTCTATGTCAAGCACTTGCAGTGGCAGCAATGTGTTTGCAAGATGAAGCTGACGCAAGACCTTCAATGGGTGAGGTTGTGGAAGCTCTTGAGCTTCTATCAAAGCCAAAAGATAGAGAATCATAG 1107 0.4291 MGCLSCCITPSQKAVDTDGQTEVSKRRADFKSYTLKSIVSTISLKTGSSRTRRINAEIQKHGTAKNEAKVFTYKELGDATDGFIDEHRIGEGGFGVVYKGRIESIDQVVAVKQLDRQGRQGTREFISEVLMLSLMKHKNLVNLIGYCIEDDHRILTYEFMSNGSLEDHLLDLAPDKVPLSWDRRVKIAEGAARGLEYLHEIAKPTVIYRDFKASNILLDDDFNPKLSDFGMAKMGPAQGQLFINTRVMGTYGYCAPEYAATGQLTHKSDVYSFGVVLLEIISGRRVIDVTRAADEQNLIQWARPLFKERSMFTQMADPLLHGNYPEKSLCQALAVAAMCLQDEADARPSMGEVVEALELLSKPKDRES 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0391 368 FunFam serine/threonine-protein kinase PBS1-like 49 159 - -
Lele48g0391 368 Pfam Protein kinase domain 85 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0391 368 SUPERFAMILY Protein kinase-like (PK-like) 66 360 IPR011009 -
Lele48g0391 368 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0391 368 PIRSF ILK 13 367 - -
Lele48g0391 368 Gene3D Transferase(Phosphotransferase) domain 1 160 368 - -
Lele48g0391 368 FunFam Serine/threonine-protein kinase PBS1 160 368 - -
Lele48g0391 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Lele48g0391 368 CDD STKc_IRAK 89 360 - -
Lele48g0391 368 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Lele48g0391 368 Gene3D Phosphorylase Kinase; domain 1 43 159 - -
Lele48g0391 368 PANTHER OS07G0668900 PROTEIN 28 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0391 Lele-ChrLele48 3463196 3465232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0391 1 365 Glycoside Hydrolase AT3G07070 57.534 1.68e-145 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele48g0391 Pkinase 9.7e-47 CL0016