Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0382 ATGCATGACAGAGATAACTACACAGACACAAGTGCGTACCACACCAACCTCAATACCTTTCTTTCTGATTTCACTTCCGACGACAACACAAACATTGAATATGGCTTCATCAATTCCTCTCATGGCCAAAACCCTGACACTGTTCACGCTTTTGGATTCTGCAGAGGCGATGTTAAGCCTGATTCCTGCCGGAGTTGCCTCCACGACGCCACGATCCTTCTCCCAAGACGATGTCCAAATCAGAAGGAGGTAGCTGAATACTATGACAATTGCACGTTCCGATACTCATATCATTCAATATTTGGAATATACAACGTCACTGATGAGACATTCTTTTTCAGGAGCACAAAAAATTCAACGAGACTTACGGATCAATATGTAAAGGTATTGTTGGATACAGTAAAGAAGCAAGCAGCAACCAGGGATTCTCATCTCCAGATGTCTGAGGATGATTGTAGTTCCTTCTTAGGGAATGTTTCCATTAGAACCCCCCAAATAAATGGTGACGGAAAGTATGGTGGAACGGTTATCAGTCCTAGCTGCTATATTAGATATGAGAGCTACCTCTTCTATGATTACACGGCGGTTTCAGCCCAGCTGCCATCTCCTCAGCCGCCACCGGAAGTTGGAGAAGAAAGTTCCAGCTTGAAGCCCTTGCGATTCCGTTTGGCAGCAGTTGAAGCTGCAGTAAACAATTTTTCAGATGAGAATAAAATAGGAAAAGGTGGATTTGGAGCAGTTTACAAGGGTATTCTTCCTAAGGGACAAGAAGTTGCGATAAAGAGACTCTCAAAAGGTTCAAAGCAAGGTGAATTAGAATTCAAGAGCGAAGTTTCATTGATGGCCAAACTTCAGCACAAAAATTTAGTGGCCTTGTTGGGATTTTGCGTGGATAATCATGAGAAGATACTTATCTATGAATATGTCTCCAACAAAAGCGTGGATTACTTTTTATTTGAAAAATCAGACATATATAGTTTTGGTGTTATAATATTAGAGGTGATTAGTGGGGAGAAGAATGCTAGCTCTAATGAACCACCCCTCTTAATTCAAGCTTGGAAACGATGGCAGAATGGAACACCACTAGAATTATTGGATCCAAGTCTGATGAGAGGATCTTACTATTCAGAAAATGAAGTCATAAAATGTTTACAGATCGGGTTACTGTGTGTTCAACCAAATCCAAATGATAGGCCAACAATGGCAAACATTGTTTTATATCTAAGTAATAATAATGCTGCCATTGAATTGGAAAATCCAAGAAAACCTACATTCTTCAGCAGTGGACGTAGAAGAGAGGAATCAAACATGGAAGTGGATTCACGTTGGGCTCAATCTTCTGTGAATCAAATGTCTGAGACTAAGTTGTTGGCTCGGTAG 1380 0.408 MHDRDNYTDTSAYHTNLNTFLSDFTSDDNTNIEYGFINSSHGQNPDTVHAFGFCRGDVKPDSCRSCLHDATILLPRRCPNQKEVAEYYDNCTFRYSYHSIFGIYNVTDETFFFRSTKNSTRLTDQYVKVLLDTVKKQAATRDSHLQMSEDDCSSFLGNVSIRTPQINGDGKYGGTVISPSCYIRYESYLFYDYTAVSAQLPSPQPPPEVGEESSSLKPLRFRLAAVEAAVNNFSDENKIGKGGFGAVYKGILPKGQEVAIKRLSKGSKQGELEFKSEVSLMAKLQHKNLVALLGFCVDNHEKILIYEYVSNKSVDYFLFEKSDIYSFGVIILEVISGEKNASSNEPPLLIQAWKRWQNGTPLELLDPSLMRGSYYSENEVIKCLQIGLLCVQPNPNDRPTMANIVLYLSNNNAAIELENPRKPTFFSSGRRREESNMEVDSRWAQSSVNQMSETKLLAR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0382 459 MobiDBLite consensus disorder prediction 424 444 - -
Lele48g0382 459 ProSiteProfiles Gnk2-homologous domain profile. 1 100 IPR002902 -
Lele48g0382 459 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 203 321 - -
Lele48g0382 459 Pfam Protein tyrosine and serine/threonine kinase 236 319 IPR001245 GO:0004672|GO:0006468
Lele48g0382 459 Pfam Salt stress response/antifungal 5 96 IPR002902 -
Lele48g0382 459 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 1 100 - -
Lele48g0382 459 Gene3D Transferase(Phosphotransferase) domain 1 305 423 - -
Lele48g0382 459 SUPERFAMILY Protein kinase-like (PK-like) 221 427 IPR011009 -
Lele48g0382 459 FunFam Cysteine-rich receptor-like protein kinase 10 202 308 - -
Lele48g0382 459 Gene3D - 1 99 IPR038408 -
Lele48g0382 459 MobiDBLite consensus disorder prediction 425 439 - -
Lele48g0382 459 Gene3D Phosphorylase Kinase; domain 1 207 304 - -
Lele48g0382 459 ProSiteProfiles Protein kinase domain profile. 233 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0382 459 ProSitePatterns Protein kinases ATP-binding region signature. 239 261 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0382 Lele-ChrLele48 3391361 3399495 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0382 3 319 Receptor kinase-like Gene Family AT4G23160 33.167 1.38e-56 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele48g0382 Stress-antifung 2.1e-18 No_clan