Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0381 ATGGCGGCTACCCTTAAAAACTGTGCAATCTGGTACACACTAATATACCTGTGTGGTTTTGTTAGCTTGGAAACCTTAGCAGCTCCAACGTACCTTGATTATTACTGCACAGAAAATGGCACTTACGCTCCTGATAGCAGATTTCATGGCAATCTCAATCCTCTCCTTAATTCCCTTGCCACCAACGCCACTCAGGGAAAGGGATATTACACCGTCATGGGCTTCGGATTAACCGATTCCGTCAACGGACTTTTCAACTGCCGGGCAGACCTGAACATCAGCAGTTGTCAACATTGTGTCGCCGCCGCTGCCACCCAGATCACGCAGCGTTGCCCTAACCAGACGGAGGCCGTCATCTGGTATGAAGAGTGCATGCTTCGCTACACTGGCAGGTTCTTCAGGTTTGACAGCATCCTCCCTGGGAAGAACTTGGTTGACGGGAAGAACATCTCCGGCAACGACCTGAATGCGTTCAATCAAACCTTGTTCGGCTTGTTGAACAATATAGCAGAACAAACAGCAAGTTCACAGACAGCGGACAAGTTCGCCACCGGCGAAGCGAAGTTTGGCAGCAACCAGACTGTGTATGGGCTTGCACAGTGCACCGTTGAACTACAGTCGGCTCAGTGTGAGACTTGCTTGAAAAATGCCATCGGAACTTTTCCGATGTGTTGTAACAGAGCCGGAGGGGCAAGAGCTCTGCTTGCGGCTTGTACTGTCCGATATGAACTGTATCCATTCTACATTTCATCTGATTCATCACTGAAGTCTTCAGGAAAGAAGAAGCTTTCATCACGAGCAGTTGCCTTGATTGTTGTCCTTGTTGTGGCTTCAGTAGTTCTGTTGGGATTTGTCAGCTTTTTGCTGCGGAGAAGAGCAAGGAAGAAACAGAGGAGTATTTTAATGGAAAATTTTGGAGAAGAACTGGCGACTTTGGAGTCCTTGCAATTCAATTTGGCCATCATTGAAGCTGCCACAAACAGTGGTTATATGTCTCCGGAATATGCAATGCACGGCCAATTTTCTGAAAAATCTGATGTATTCAGTTTTGGAGTCATAGTTCTTGAGATTGTTAGTGCAAAAAGGAATGCTCGTCTTATTCAAACACAAGATCTTGATGACCTATTAAGTCAGGCTTGGAAACATTGGAGGAATCAGACACCGCTTGAGATAGTGGACCCAGAAATAAAAGATTCATGTTCGCAGAGTGAAGTGATTAAGTGCATCCAAATAGGTTTATTATGCGTTCAAGAGAACCCAGAAAATAGGCCCACAATGGCAAGGATAGTTTCATGTCTAAGTAGCCTCTTAGCTGAACTGCCATTGCCTCGAGAACCAGCATTTCACATGGATACTGATTTGAAGCTGAACTTGGTATCATGGGAATCCAGTACAGGTCAATCTACCTATAATTCTACGGCATCCTCAAATCATGAAATGTCTAAGAGTAATCATTTTCCAAGATAG 1467 0.4519 MAATLKNCAIWYTLIYLCGFVSLETLAAPTYLDYYCTENGTYAPDSRFHGNLNPLLNSLATNATQGKGYYTVMGFGLTDSVNGLFNCRADLNISSCQHCVAAAATQITQRCPNQTEAVIWYEECMLRYTGRFFRFDSILPGKNLVDGKNISGNDLNAFNQTLFGLLNNIAEQTASSQTADKFATGEAKFGSNQTVYGLAQCTVELQSAQCETCLKNAIGTFPMCCNRAGGARALLAACTVRYELYPFYISSDSSLKSSGKKKLSSRAVALIVVLVVASVVLLGFVSFLLRRRARKKQRSILMENFGEELATLESLQFNLAIIEAATNSGYMSPEYAMHGQFSEKSDVFSFGVIVLEIVSAKRNARLIQTQDLDDLLSQAWKHWRNQTPLEIVDPEIKDSCSQSEVIKCIQIGLLCVQENPENRPTMARIVSCLSSLLAELPLPREPAFHMDTDLKLNLVSWESSTGQSTYNSTASSNHEMSKSNHFPR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0381 488 FunFam Cysteine-rich receptor-like protein kinase 10 142 247 - -
Lele48g0381 488 Gene3D Transferase(Phosphotransferase) domain 1 303 442 - -
Lele48g0381 488 Gene3D - 29 133 IPR038408 -
Lele48g0381 488 Gene3D - 142 247 IPR038408 -
Lele48g0381 488 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 133 - -
Lele48g0381 488 MobiDBLite consensus disorder prediction 467 488 - -
Lele48g0381 488 Pfam Protein tyrosine and serine/threonine kinase 328 433 IPR001245 GO:0004672|GO:0006468
Lele48g0381 488 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 21 251 - -
Lele48g0381 488 ProSiteProfiles Gnk2-homologous domain profile. 138 247 IPR002902 -
Lele48g0381 488 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Lele48g0381 488 SUPERFAMILY Protein kinase-like (PK-like) 327 457 IPR011009 -
Lele48g0381 488 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Lele48g0381 488 Pfam Salt stress response/antifungal 155 245 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0381 Lele-ChrLele48 3378806 3381920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0381 329 452 Receptor kinase-like Gene Family AT4G05200 45.968 4.81e-34 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele48g0381 PK_Tyr_Ser-Thr 8.5e-11 CL0016