Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0380 ATGTCAGATTTCATTCATTCCTTTATGATGACGAAAACAACTTCAATTTTCTTGGCTCTAATTTCACTCCTTTCTCATCTTCTTCTTCCTCCTCTCACCGCCCAGCCTGACGACTTCGTTTTCCACAAGTGCTTCAATGAAAGTGGTAACTACACAAAACCAAGTACCTACTACACCAACCTCAATACCCTTCTTTCTAAATTCACTTCTGATACCAAAATTGACTATGGCTTCTACAATTCCTCTTATGGTGAAACCCTCGACATGGTTAACGCACTTGGAATGTGCAGAGGAGATGTGAAGCCAGATTCTTGTCGTAGTTGTCTCAACAATGCCATAACCCTTCTTCCAAAGCTATGTCCATATCAGAAAGAAGCATTCGGGTACTATGACTTATGCATGCTTCGATACTCGAGTCGTGCGATGGTTGGGATTTACCAGGACCATGACTTCTACGAGGATTCTAGAAACCTTACTAATGTAGCAGATGCAAACAAATACAACGTTGCGCTTAATGATCTGATGAAAAGTCTAAGAGACAAGGCTAAGGGTGGTGATGAATCTCATGATCGTAAGGTGGCTGCGGGAAACGCAAAAGCTGATGAGGATGAAACTGTGTATGGTCTTGTTCAGTGCACGCCTGATTTGAATGAGCAAGATTGCTTCGATTGTTTGAAGGATTCTATTTTTTATATCCCAAATTGTTGTCAGGACAAGGTTGGTGGGAGGGTTATCAGATTGAGCTGCAATATTAGATTTGAGAATTTCTTATTCTTTGATCCTTCACGTGTTGATTCAATACAATTACCTTTCTCCCCTCCATCAACCAATACAACTTCCTCACAAGGAATTAGCCCTAAATCAAGAACTACCATTATTGTAACTGTGCTGATTATTGGTGCCTTTATTGCCTTTCTCATAGTATTCTTCATAGTTAGAAGATCAAAGAAAAACCATGAAATTGAATCTACAACAAAGGATGATGATGATTTAATTAAACCAACTGAGATGTTGCAAATCGATTTTAACACCATCAAGCTCGCAACTGATAACTTCTCTGATGCAAATAAGCTTGGACAAGGAGGATTTGGGCCTGTGTATAAGGGTCTACTTCCTGATGGACAAGAAGTTGCTGTGAAAATGTTGTCCAAGAATTCTAGTCAAGGAGATCTAGAATTTAAGACTGAAGTGATGTTGGTAGCTAAACTTCACCATCGGAATTTAGTAAGACTACTTGGTTTCTGTTTAGAAAAGACAGAAAAGCTACTCGTCTATGAATTTCTTCCGAATAGAAGTCTTGATTTCTTCTTATTCGATCCAAACCAGCAAACTAATTTGAATTGGCTGATACGATACAAGATTATAAGAGGCATTGCTCGTGCTCTACTTTATCTTCATCAAGATTCAAGATTACGCATTATTCATCGTGATCTTAAAGTGAGCAATATTCTATTAGATGAAGAATTGAATCCTAAAATATCAGATTTTGGCACCGCAAGACTATTTAAGATGGATCAAACTCGAAGCAATACTAATCGAATTGTTGGAACCTTCGGCTATATGGCACCAGAATATGTATTGTATGGTCAATGTTTGATAAAATCAGATGTCTATAGTTTCGGTGTATTAGTTCTAGAGATCATAAGTGGAAAGAAAAACAACAGCACCTTTCAAGTGGAGAATACACAGGATCATCTTGATCTATTAAGTTTTGTATGGAAAAATTGGAGGGAAGGGACAGCCTCAAATGTAGTGGATCCTGTGATAAGCAATGGTTCAAGGAACGAAATAATGAGATGCATCCACATAGCATTGCTGTGCGTTCAAGAAAATGCAGCTGATAGGCCAAGCATGGCCTCGGTCTCATTTATGCTCAACAGCTTCTCTTCCTCTCTCCCTTTACCTTCGGAACGTCGATTTCTTGTGAATTACAGCAGTTCATCTGAGACAATGACGACTTTGAGACATAACAGTTCATCAGAGAAGACAAGAAGATCAAGTGAACAAGGAAGGAGTAACTCTAATGAGCCATCATTAAATGAGTTGTCGATTACGGAACTATATCCTCGCTAG 2073 0.3878 MSDFIHSFMMTKTTSIFLALISLLSHLLLPPLTAQPDDFVFHKCFNESGNYTKPSTYYTNLNTLLSKFTSDTKIDYGFYNSSYGETLDMVNALGMCRGDVKPDSCRSCLNNAITLLPKLCPYQKEAFGYYDLCMLRYSSRAMVGIYQDHDFYEDSRNLTNVADANKYNVALNDLMKSLRDKAKGGDESHDRKVAAGNAKADEDETVYGLVQCTPDLNEQDCFDCLKDSIFYIPNCCQDKVGGRVIRLSCNIRFENFLFFDPSRVDSIQLPFSPPSTNTTSSQGISPKSRTTIIVTVLIIGAFIAFLIVFFIVRRSKKNHEIESTTKDDDDLIKPTEMLQIDFNTIKLATDNFSDANKLGQGGFGPVYKGLLPDGQEVAVKMLSKNSSQGDLEFKTEVMLVAKLHHRNLVRLLGFCLEKTEKLLVYEFLPNRSLDFFLFDPNQQTNLNWLIRYKIIRGIARALLYLHQDSRLRIIHRDLKVSNILLDEELNPKISDFGTARLFKMDQTRSNTNRIVGTFGYMAPEYVLYGQCLIKSDVYSFGVLVLEIISGKKNNSTFQVENTQDHLDLLSFVWKNWREGTASNVVDPVISNGSRNEIMRCIHIALLCVQENAADRPSMASVSFMLNSFSSSLPLPSERRFLVNYSSSSETMTTLRHNSSSEKTRRSSEQGRSNSNEPSLNELSITELYPR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0380 690 Gene3D Phosphorylase Kinase; domain 1 312 427 - -
Lele48g0380 690 ProSiteProfiles Protein kinase domain profile. 352 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0380 690 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 37 142 - -
Lele48g0380 690 ProSiteProfiles Gnk2-homologous domain profile. 149 258 IPR002902 -
Lele48g0380 690 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 689 - -
Lele48g0380 690 Pfam Salt stress response/antifungal 159 255 IPR002902 -
Lele48g0380 690 Pfam Salt stress response/antifungal 44 139 IPR002902 -
Lele48g0380 690 SMART serkin_6 352 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0380 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Lele48g0380 690 MobiDBLite consensus disorder prediction 651 690 - -
Lele48g0380 690 Pfam Protein kinase domain 353 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0380 690 FunFam Cysteine-rich receptor-like protein kinase 28 428 633 - -
Lele48g0380 690 ProSiteProfiles Gnk2-homologous domain profile. 39 142 IPR002902 -
Lele48g0380 690 FunFam Cysteine-rich receptor-like protein kinase 10 313 427 - -
Lele48g0380 690 Gene3D Transferase(Phosphotransferase) domain 1 428 635 - -
Lele48g0380 690 Gene3D - 37 141 IPR038408 -
Lele48g0380 690 Gene3D - 149 258 IPR038408 -
Lele48g0380 690 FunFam Cysteine-rich receptor-like protein kinase 10 152 258 - -
Lele48g0380 690 SUPERFAMILY Protein kinase-like (PK-like) 337 656 IPR011009 -
Lele48g0380 690 CDD STKc_IRAK 358 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0380 Lele-ChrLele48 3373426 3376413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0380 27 651 Receptor kinase-like Gene Family AT4G21410 46.728 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele48g0380 Pkinase 8.3e-45 CL0016