Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0379 ATGAAAACCCTCTTTTTTCTGGCTCTGTTTTCGTTATTCCTTTCCCATCTTCTCTTCCTCACAGTCGCCCAGGAGGAGCTCCACCCTGATTACGTTCATCCCAATTGTTCCATTGACAAAGGAACCTACACAAACACAAGTGCCTACTACACCAACCTCAAAACCCTTCTTTCTAAATTCACCACCAATACAAAAGATGACTATGGCTTCTACAATTCCTCGTACGGCCAAAACCCTGACACGGTTTTCGCATCCGGACTCTGCCGAGGAGATGTTACACCGGATGTTTGCCGGAGTTGCCTCAATAATGCCACAAATCTTCTCCCCCAGAACTGTACAAATCAGAAGGAGGCATTTTTGTACTATGACTTATGCAGCTTTCAATACTCAAGTAGCTCAATGTTTGGGATTTACAAGGACCCTGATTTTTACAACGCAATTAATAACCAAGAAGATGCAGCAGATGCAGACAAGTACACAGATGCACTTAATCGGCTAATGAAAGTTCTTAAGACCAACGCCGCAGCCGGTGGCCCTTATCGTAAGGTGGCTGCTGGAAACGCCTCGGCCGCATTCCAATATGTGTTTGGTCTTGCTCAGTGCACGCCTGATTTGACTCAGCAAGATTGTGAAGCTTGCTTGGAAAAGGCCATCTCAGATATCCCACTCTGTTGTCAGAACAAGGTTGGTGGTAGGGTTATCAAAAAGAACTGCAATCTTAGGTTTGAGAAGGTCAGATTCTATAATCCTACAGTTGTTGATCCAATACAATTATCTCCATCTCCTCCACCTCTTGATCCTACCACTAATACTAAATCCACTCAAGGAAAAAACAATGGATCAAGAACCATTATCATTGTCTTGGCTGTGGTGTTTGGTGCCTTATTCTTCGCCCTTCTCATCTTGATTTTCATCTATTTTGCAATTAGGAAATCGAAGAAAACCGTTGAAAATGAAGCTGAAATAAAGGATGATGAGGAAATTAAACCTTCTGATTCATTGCAATTTGACTTTGAAACCGTCAAAGTCGCTACAGATAACTTCTCGATTGCAAATAAACTTGGACAAGGAGGATTTGGGCCAGTATATAAGACTAGCAAAATTGTTGGAACTTACGGATACATGGCACCAGAATATGCAATGCATGGACAAATATCAACAAAATCGGATGTATTCAGTTTTGGTATACTAGTTCTCGAGATTATAAGTGGCCAGAAAAATAGTAGCGTGATTGACGAGGAGAATATACAAGATCTTTTAAGCTTTGTATGGAAAAATTGGAGGGAAGGGACAACCTCAAGTATAGTAGATACTGTGATAAGCAATGGTTCAAGGGACGAAATAATGAGATGCATTCACATAGCATTATTGTGCGTTCAAGAAAATGTAGGAGACAGGCCTACCATGGCTTCTGTTGAACTTATGCTAAACAGCTACTCTTCGTCTCTCCCTTTACCTTCGCGGCCCCCGTGCTTAATGAATTTCAGCACTACGCTTGAGATGCAACCCAGAGAGGAAAATGAAGGAGACGAAGTACGTAGCTCTGCTTAA 1551 0.4197 MKTLFFLALFSLFLSHLLFLTVAQEELHPDYVHPNCSIDKGTYTNTSAYYTNLKTLLSKFTTNTKDDYGFYNSSYGQNPDTVFASGLCRGDVTPDVCRSCLNNATNLLPQNCTNQKEAFLYYDLCSFQYSSSSMFGIYKDPDFYNAINNQEDAADADKYTDALNRLMKVLKTNAAAGGPYRKVAAGNASAAFQYVFGLAQCTPDLTQQDCEACLEKAISDIPLCCQNKVGGRVIKKNCNLRFEKVRFYNPTVVDPIQLSPSPPPLDPTTNTKSTQGKNNGSRTIIIVLAVVFGALFFALLILIFIYFAIRKSKKTVENEAEIKDDEEIKPSDSLQFDFETVKVATDNFSIANKLGQGGFGPVYKTSKIVGTYGYMAPEYAMHGQISTKSDVFSFGILVLEIISGQKNSSVIDEENIQDLLSFVWKNWREGTTSSIVDTVISNGSRDEIMRCIHIALLCVQENVGDRPTMASVELMLNSYSSSLPLPSRPPCLMNFSTTLEMQPREENEGDEVRSSA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0379 516 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 364 - -
Lele48g0379 516 SUPERFAMILY Protein kinase-like (PK-like) 364 499 IPR011009 -
Lele48g0379 516 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 362 481 - -
Lele48g0379 516 FunFam Cysteine-rich receptor-like protein kinase 10 143 247 - -
Lele48g0379 516 Pfam Protein tyrosine and serine/threonine kinase 371 472 IPR001245 GO:0004672|GO:0006468
Lele48g0379 516 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Lele48g0379 516 Pfam Salt stress response/antifungal 153 244 IPR002902 -
Lele48g0379 516 Gene3D Transferase(Phosphotransferase) domain 1 369 485 - -
Lele48g0379 516 SUPERFAMILY Protein kinase-like (PK-like) 333 365 IPR011009 -
Lele48g0379 516 Gene3D Phosphorylase Kinase; domain 1 308 368 - -
Lele48g0379 516 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 134 - -
Lele48g0379 516 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Lele48g0379 516 Gene3D - 141 247 IPR038408 -
Lele48g0379 516 Gene3D - 30 133 IPR038408 -
Lele48g0379 516 ProSiteProfiles Gnk2-homologous domain profile. 141 247 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0379 Lele-ChrLele48 3368458 3371744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0379 365 493 Receptor kinase-like Gene Family AT4G21410 61.069 4.69e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele48g0379 PK_Tyr_Ser-Thr 1e-08 CL0016