Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0376 ATGGCTCCAGTTTCTTTGGTTATGCTTTCATTCCTAATCTCTCATCTTACCACTCTCACCTCCCTGCAACCTCCCGACTTGAGATATAAATTATGTTTCGATTGGAGAGGTAACTACACAAAAACAAGTACCTACGAAACCAACCTTAATATCACTCTTTCATATCTCACTTCCAACATAGAAATTGACTATGATGGCTTCTACAAATTTTCTCAAGGCCAAGATCCTGATAGAGCCAGCGCCATTGGATTATGTCGAGGTGATATTAAGCCAAATGAATGCCGTACATGTCTGAAGAATGCCTCAGTTCTTGTCCCCAAGTCTTGTCCGAATCTGAGGGAAGCAATGGGAGGCTATGATGAATGCTTTCTACGATACTCGAACCGTTCAATATTTGGGGTCATGGAAGATGATGATTCGATAAATTTGCCGAACGGGAATAATTTAACAGAGAAGGACAAGTACAACCAAGTGGTTAAGGAGTTATTGTATGGATTGACTAGCAAAGCTGCCAACACTGATTCATTTCGTAAGTATGAAACAGCAAATGGATCGGCTCCGAACTCGCAAACTGTGTTTGGTGCAGTTCAGTGCACTCCTGATTTGAATGAAGAAGGTTGCTCCAATTGCTTGACAGGGGCTATTGTAGAACTTGCAAATTGTAATTGTTCCACAAAGACAGGTGGTAGAGTTATCAAACCCAGCTGTAACGTTAGTGGGTACATGGCTCCAGAGTATGCGATGCATGGGCAATTCTCAACAAAATCAGATGTCTTTAGCTTTGGCGTCTTAATTCTAGAGATTGTCAGTGGGAAGAAGAATAATAGCAGCTTTCATGAAGATAACGGACGAGATCTGTTAGACTTTGCGTGGAAAAATTGGAGAGGAGGGACAACCTGGAGCATAGTAGATCAGTTCTTCTCTTCCATTACCATCGCATCCTCCACTTTTAACGAGTACCAACTGCTTACCAGAGATGAACTCTTGGGAGTATAG 996 0.4197 MAPVSLVMLSFLISHLTTLTSLQPPDLRYKLCFDWRGNYTKTSTYETNLNITLSYLTSNIEIDYDGFYKFSQGQDPDRASAIGLCRGDIKPNECRTCLKNASVLVPKSCPNLREAMGGYDECFLRYSNRSIFGVMEDDDSINLPNGNNLTEKDKYNQVVKELLYGLTSKAANTDSFRKYETANGSAPNSQTVFGAVQCTPDLNEEGCSNCLTGAIVELANCNCSTKTGGRVIKPSCNVSGYMAPEYAMHGQFSTKSDVFSFGVLILEIVSGKKNNSSFHEDNGRDLLDFAWKNWRGGTTWSIVDQFFSSITIASSTFNEYQLLTRDELLGV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0376 331 ProSiteProfiles Gnk2-homologous domain profile. 137 245 IPR002902 -
Lele48g0376 331 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 16 239 - -
Lele48g0376 331 Gene3D - 140 241 IPR038408 -
Lele48g0376 331 Gene3D - 26 130 IPR038408 -
Lele48g0376 331 Pfam Protein tyrosine and serine/threonine kinase 241 277 IPR001245 GO:0004672|GO:0006468
Lele48g0376 331 SUPERFAMILY Protein kinase-like (PK-like) 235 296 IPR011009 -
Lele48g0376 331 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 131 - -
Lele48g0376 331 Pfam Salt stress response/antifungal 147 238 IPR002902 -
Lele48g0376 331 Pfam Salt stress response/antifungal 37 128 IPR002902 -
Lele48g0376 331 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
Lele48g0376 331 FunFam Cysteine-rich receptor-like protein kinase 10 139 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0376 Lele-ChrLele48 3351614 3354779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0376 240 315 Receptor kinase-like Gene Family AT4G38830 56.579 3.42e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele48g0376 Stress-antifung 6e-12 No_clan