Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0373 ATGTTGGATCTTGGGCAACTTGAGGGCAGGCTCTCCAATGGACAAAATATTGCCGTCAAAAGGTTGTCAGGTGCTTCTGGGCATGGAGATACTGAGTTTAAGAATGAAGTACTACTAATGGCTAAGCGTCACCGCCGAAAGTTTGTTCAGCTACTTGGTTTTTGTTTGGAAGAGAAAGAACAAATCCTTATCTATGAACTTCTTCCTAATAGAAGCCTTGACTACTTCATATTCGAACCCTTGCAACCTGCATTTTTTATGAATAACAAAAGTTTATCACTGGTCAAACCTGAGGAGCACAGTTCTGTGTCAGCAAGCTCAAGTGAACAAAATAGTAAAACTGCTGATATATTATCAGTAGACGAGGCCTCAATAACTAAGCTGCATCCTCGTGGAAGGACGATGAAGGAAGCAGTGAAGAAATTAGCTTTTCTTGCAGGTTTAGGCTGTCAAAGGCTCGAAGCACTGTTGGTGTACAATGGAAATAAAAGCTATTCAGATTCTTCCTGCTGCTTGTACAAGTTTGAATGCAACCTTATAACCTACCTTCATAAGGCCTGTTATGATCAACCTAGTAGCAGAAATCATGCAAATTTCAAATCCAATCTCAATTTCCTCTTGAATTCTTTGTCTTCTCAATCATCCCTTCACAGCTTTTACAAAGCTTTTACACGCAACATTTACGGTCTCTTCCTTTGCAGGGGAGATGTTTCCATTCAAACCTGCCAAAACTGTATCAAAGTAGCAACTCAAGAGATCAAAATTAAATGTGCAAATAACCATAGTGCAATCATTTGGTATGATCAGTGCATGCTCAGATACTCTCAAAAGAACTTCTTTGGAGTGGCACAAATTTCGCCAATAGCACTCATGTGGAATCAGAAAAATAGAACTTCAGTCAATCAACCTGATGTCGATGCGCTAGCTCTGATTTACCAACTTATAACAGAAGCCGCAAATACATCTATGCTGTTCCGAGCAAACGGTTCAGAGGTGGTGACAAATAGTTCTGAGCATCGATATGGACTAGTGCAGTGCACAAGAGACTTAAATAGTAGTTCATGCAGCTTCTGTTTGTCACACTTGGTGGTAGAAGCACAGAAGTTTATCCAACAGAAGGCTGGTTGGCACATATTTGGTCCAAGTTGCAATATAAGACATGAAAATTACATCTTCTATCAGCAAACTTGGGGACCAGAGATTTCCCCTATATCACCAATGAACCAGGCAGCACCAATGAACCAGACAGATGGTGCAGGCTCTGCAGAAGAATTCACATCGAGCGCTGTAGCCACTGTAGTTATGCTTGTACCAATTGCAATGGCTGCAGCTTTTTTGGGTTTTGCAAGCTATGCATGTTTTCGCAGGAAAAGAAGACTTAGAGGGGGAGAAACAACTGATGAAATTCTGTTGCAGAAGTTGGAGACTTCAAAGAAGCACCACTCGGAAGAGCAAGGAACCACGAAAGATGAGTACGACAGTGAAGTTCAAAACTATAGTTTGAAGACCATAAAGGCATGGCGACTCTGGAATGAAGGCAAAGGACTTGAACTTGTGGAGGGTGACTTGGTCAACACTTGCAGTGATAAGGATGAAGCATTGAGATGGATCCATATTGGGCTTCTATGTGTTCAAGAGAATCCACAAGATAGGCCCACAATGTCATCAGTAGTTCTCATGCTAGCAAGTTCCAGTAATCTTCCTCACCCATTTGCTCCTCCATTTTCAGTCGGCAGATTCTTCGCTGCTGCTATTCAGTCCTCCCCCTCCACAAGTGTTTCCAGTAAGAAAGTTTCATGTGATTGTTGA 1809 0.4179 MLDLGQLEGRLSNGQNIAVKRLSGASGHGDTEFKNEVLLMAKRHRRKFVQLLGFCLEEKEQILIYELLPNRSLDYFIFEPLQPAFFMNNKSLSLVKPEEHSSVSASSSEQNSKTADILSVDEASITKLHPRGRTMKEAVKKLAFLAGLGCQRLEALLVYNGNKSYSDSSCCLYKFECNLITYLHKACYDQPSSRNHANFKSNLNFLLNSLSSQSSLHSFYKAFTRNIYGLFLCRGDVSIQTCQNCIKVATQEIKIKCANNHSAIIWYDQCMLRYSQKNFFGVAQISPIALMWNQKNRTSVNQPDVDALALIYQLITEAANTSMLFRANGSEVVTNSSEHRYGLVQCTRDLNSSSCSFCLSHLVVEAQKFIQQKAGWHIFGPSCNIRHENYIFYQQTWGPEISPISPMNQAAPMNQTDGAGSAEEFTSSAVATVVMLVPIAMAAAFLGFASYACFRRKRRLRGGETTDEILLQKLETSKKHHSEEQGTTKDEYDSEVQNYSLKTIKAWRLWNEGKGLELVEGDLVNTCSDKDEALRWIHIGLLCVQENPQDRPTMSSVVLMLASSSNLPHPFAPPFSVGRFFAAAIQSSPSTSVSSKKVSCDC 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0373 602 ProSiteProfiles Gnk2-homologous domain profile. 285 392 IPR002902 -
Lele48g0373 602 Gene3D Transferase(Phosphotransferase) domain 1 470 568 - -
Lele48g0373 602 Gene3D Phosphorylase Kinase; domain 1 5 67 - -
Lele48g0373 602 SUPERFAMILY Protein kinase-like (PK-like) 11 82 IPR011009 -
Lele48g0373 602 Pfam Salt stress response/antifungal 193 276 IPR002902 -
Lele48g0373 602 Pfam Salt stress response/antifungal 323 390 IPR002902 -
Lele48g0373 602 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 179 398 - -
Lele48g0373 602 ProSiteProfiles Gnk2-homologous domain profile. 181 279 IPR002902 -
Lele48g0373 602 Pfam Protein tyrosine and serine/threonine kinase 12 80 IPR001245 GO:0004672|GO:0006468
Lele48g0373 602 Gene3D - 286 392 IPR038408 -
Lele48g0373 602 Gene3D - 180 279 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0373 Lele-ChrLele48 3315705 3321889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0373 8 79 Receptor kinase-like Gene Family AT4G05200 51.389 2.50e-18 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele48g0373 Stress-antifung 3.5e-08 No_clan