Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0347 ATGCCTCTTTCATCGGAGTACTCAACCGCCGGTTACTTGTTCTGCCGCGAGGACGCCGCCGACGTGTTTTACTCCGGTGAAGATGCGTCGATCTTCCGCCACACGCCATCAGCATCATCTTACATCCCGCCCTATTCTCCGCCGTCCGATGAGATCACCATCGGCGAACTCATCGACTTAGAGTCACACCTCATACCGAACCAAGATTACCTTCATCGCCTCCGTGACTGTACGATCGACTCCACCAATCGCGAGAAGTCCATTAACTGGATCTTCAAGGTGCACGCCTTTTACCAGTTTCGTCCAGTAACGGCGTTACTCTCCGTCAACTACTTCGACCGCTACCTCTCGTGCTCTTCTTCTCTTCCGCCAGCTGGGTGGCCGTTTCGTCTATTATCAGTGGCGTGCTTGTCTCTTGCGGCGAAAATGGAGGAGTCTCGAATCCCGAACTTGCTAGCCCTGCAAATATTCGATCCCGGCCTCGTATTTGAATCCAAGTCGGTTCAGAGGATGGAGCTCCGGATCTTGACCCAACTCAACTGGAGATTGCGCTCTGTCACGCCCTTCGATTACCTCCATTACTTCTTCTCCAAACTCCCTTCGTCCTCATCCGATCCTAAAGCCGGATCGGCGACCCAGTTCTTCAGAGCCTCCCAGTTCATTCTTACCACCACTCGCGTGATTGATTTCTTGAGATTCGCACCGTCGAGCATTGCAGCTGCCGCCGTGCTCTGCTCAGCCGGCGTGGCCTATGACGACTGCCCCCAATCACTGCCATGTTTTCATGACAGAATAAACAAAGAAATGGTGAGAAGCTGTCATCGACTAATGGAGGCGTACACGTGTCGCGGCGACGAGGCGCCTCCTCCTTCAAGCCCCATCGGCGTGCTTGAAGCCGCCACTCATGCCAACTCCAACACTGGTTCTGAAAATGCAAGCTCTAGCACCACCCAATCTGACCGCCCGCCGCGGAGGAAGCGGCTGCGATCCTCTGCACCGAATGGACAGGCAGTAGAGCGCCTGTATTAG 1029 0.5471 MPLSSEYSTAGYLFCREDAADVFYSGEDASIFRHTPSASSYIPPYSPPSDEITIGELIDLESHLIPNQDYLHRLRDCTIDSTNREKSINWIFKVHAFYQFRPVTALLSVNYFDRYLSCSSSLPPAGWPFRLLSVACLSLAAKMEESRIPNLLALQIFDPGLVFESKSVQRMELRILTQLNWRLRSVTPFDYLHYFFSKLPSSSSDPKAGSATQFFRASQFILTTTRVIDFLRFAPSSIAAAAVLCSAGVAYDDCPQSLPCFHDRINKEMVRSCHRLMEAYTCRGDEAPPPSSPIGVLEAATHANSNTGSENASSSTTQSDRPPRRKRLRSSAPNGQAVERLY 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0347 342 FunFam D6-type cyclin 67 180 - -
Lele48g0347 342 Pfam Cyclin, N-terminal domain 57 183 IPR006671 -
Lele48g0347 342 MobiDBLite consensus disorder prediction 298 319 - -
Lele48g0347 342 FunFam D6-type cyclin 181 275 - -
Lele48g0347 342 ProSitePatterns Cyclins signature. 84 115 IPR006671 -
Lele48g0347 342 SMART cyclin_7 89 177 IPR013763 -
Lele48g0347 342 PANTHER CYCLINS 58 278 IPR039361 -
Lele48g0347 342 CDD CYCLIN 83 176 IPR013763 -
Lele48g0347 342 SUPERFAMILY Cyclin-like 53 183 IPR036915 -
Lele48g0347 342 Gene3D - 56 273 - -
Lele48g0347 342 Gene3D - 67 184 - -
Lele48g0347 342 MobiDBLite consensus disorder prediction 284 342 - -
Lele48g0347 342 SMART Cyclin_C_2 186 318 IPR004367 -
Lele48g0347 342 Pfam Cyclin, C-terminal domain 186 281 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0347 Lele-ChrLele48 3112887 3114526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0347 1 328 Core Cell Cycle Gene Families AT1G70210 37.870 1.77e-62 201