Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0316 ATGAGTTGCAGCGGTTGTCGTGTTCTCCGGAAACGATGCAGCGACGAGTGCATGCTCCGGCATTGCCTTCAGGGGATCCAAGACCCTCAAGCCCAAGCCCACGCCACCCTCTTCGTCGCCAAGTTCTTCGGCCGTGCCAGCCTCATGTCTTTCGCCTCCGCCGTTCCCCCCTCACAAAGACCCCATTTGTTTCAGTCGTTGTTGTATGAAGCGCTGGGACGTACCATAAACCCAGTGAATGGAGTTGTGGGGCTTCTCTGCACAGGTAATTGGCATCTCTGCCAGCTGGCGCTGGAAACGGTGCTACGTGGCGGCTCGTTGAGTCCACTTCCTCCGGATTTCTCCATTGTTGGTGGCTGCGGCAGAGGTAGATCAGTTCCGGCGGAAGATGGGAGTTTCTGGTCTGCCATAAACAGTTGTACCAATCAGAGGGAAGTGAAGGGTGAAAGGTCGTCAATGATGTTAAAGAGAAAGGTAATGAATGGTTCTAATATTGATCGCTTGGAGAATTCTCAAGCACGAGATCGGATGTTGCCGGAGAGAGACAAGAAGCACCGAGACGCGACGCCTTCCACGGAGGATTTTGAAAAGACCACGTTTGGGAGTGCCCAAAGGAGACTCCTAAGACTATTCTACTGA 639 0.5321 MSCSGCRVLRKRCSDECMLRHCLQGIQDPQAQAHATLFVAKFFGRASLMSFASAVPPSQRPHLFQSLLYEALGRTINPVNGVVGLLCTGNWHLCQLALETVLRGGSLSPLPPDFSIVGGCGRGRSVPAEDGSFWSAINSCTNQREVKGERSSMMLKRKVMNGSNIDRLENSQARDRMLPERDKKHRDATPSTEDFEKTTFGSAQRRLLRLFY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0316 212 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lele48g0316 212 MobiDBLite consensus disorder prediction 172 194 - -
Lele48g0316 212 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Lele48g0316 212 MobiDBLite consensus disorder prediction 172 193 - -
Lele48g0316 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0316 Lele-ChrLele48 2863829 2864923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0316 1 130 AS2 family AT3G49940 67.692 1.03e-56 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele48g0316 LOB 1.1e-24 No_clan