Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0273 ATGGAAGGTAGAAAGGGATTAGTTTTGGCAGTTCAAGATTGTGCGGTTCCGTTCCGTTTAAAGTCGGAAATGCATAGAGAAAGAGTGAAATTAGTGGGGTGGGTAACCGGCTCGTGTCGGTGGGAGTTGCCCGTTACAACCTCATCAAGTCGTCACCGGCCTTCAGTCTCCAGCTGATTGATAACGACGAATATAAGGACAATGGAGGCTTTGCAGGTAGACGTGGATCGGGTTAAGGGTCCCTGGAGTCCTGAGGAGGACGAGTTGTTGAGGCAGCACGTGCAACGGCACGGCGCTCGAAATTGGTCGACGATAAGTAAGGCGATCCCCGGACGATCTGGAAAGTCGTGCCGGCTCCGGTGGTGCAACCAGCTCTCACCGGATGTAGAGCGTGGTGCCTTCACTCCCGAGGAGGACGAGATCATAGTGAAGGCACACGCCAAGTTCGGCAACAAATGGGCCACCATAGCCAAGCTCCTCAACGGCCGTACGGATAACTCCGTCAAGAACCACTGGAACTCGACTTTGAAGCGCAAGTACTCGTCATTGGTCGGCGACGTCGAAGATCCATCGCTCCAACCCTCGAAGAAGCCGGCCACAGGAGATCGATTGCTGACGATTCCACCGGTATTAGCGAGTCATTGTTACAGCCCGAGCAGCCAAACTGGATCTGATGTAAGCGATTCCGGTCATCAGGTAGTCTCTAGTTCGACGACTCTAATTCAGCCTGAATCAAGACCGCCGGATGCGATCTTGAAGAAGGATCTCTCAACAGAACTCACTCTGTCTCCTCCTGGATTTGAGTCGAAGGAGTTATGGAAGGTTAAAGATTCAGTGGCTATCGCAGAGCATGAGAAGGCATTAACAGCATCGATATTATCATCAACGGAGAAGAAGCAGGGTGGAATCACGACATTTGGTCCAGAGTTACTGGCAGTGATGAAGGAGATGATAAGGGATGAAGTGAGAAATTACATGGCGGCTATGTAA 990 0.5141 MEGRKGLVLAVQDCAVPFRLKSEMHRERVKLVGWVTGSCRWELPVTTSSSRHRPSVSSXLITTNIRTMEALQVDVDRVKGPWSPEEDELLRQHVQRHGARNWSTISKAIPGRSGKSCRLRWCNQLSPDVERGAFTPEEDEIIVKAHAKFGNKWATIAKLLNGRTDNSVKNHWNSTLKRKYSSLVGDVEDPSLQPSKKPATGDRLLTIPPVLASHCYSPSSQTGSDVSDSGHQVVSSSTTLIQPESRPPDAILKKDLSTELTLSPPGFESKELWKVKDSVAIAEHEKALTASILSSTEKKQGGITTFGPELLAVMKEMIRDEVRNYMAAM 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0273 329 FunFam MYB transcription factor 79 130 - -
Lele48g0273 329 CDD SANT 133 176 IPR001005 -
Lele48g0273 329 ProSiteProfiles Myb-like domain profile. 74 125 IPR001005 -
Lele48g0273 329 Gene3D - 78 130 - -
Lele48g0273 329 PANTHER MYB PROTEIN-RELATED 79 229 - -
Lele48g0273 329 Gene3D - 132 198 - -
Lele48g0273 329 MobiDBLite consensus disorder prediction 215 246 - -
Lele48g0273 329 CDD SANT 81 123 IPR001005 -
Lele48g0273 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 125 IPR017930 -
Lele48g0273 329 SUPERFAMILY Homeodomain-like 76 172 IPR009057 -
Lele48g0273 329 Pfam Myb-like DNA-binding domain 82 139 - -
Lele48g0273 329 SMART sant 130 178 IPR001005 -
Lele48g0273 329 SMART sant 78 127 IPR001005 -
Lele48g0273 329 ProSiteProfiles Myb-like domain profile. 126 176 IPR001005 -
Lele48g0273 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 180 IPR017930 -
Lele48g0273 329 FunFam Transcription factor MYB44 133 179 - -
Lele48g0273 329 MobiDBLite consensus disorder prediction 215 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0273 Lele-ChrLele48 2580974 2582583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0273 75 329 MYB Transcription Factor Family AT5G67300 47.670 1.07e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele48g0273 Myb_DNA-bind_6 1.1e-18 CL0123