Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0272 ATGAATCTTTACTCCAAGAACCCCCATTGTTTCTGGGGTAAAGCTTCGTTCTTTTTTCTTCTCCTTCTTCCTTCCTCTGCTCTGAACACTGATGGGATTTCTTTACTTTCTTTCAAATACTCCATCCTCAGCGACCCATCATCAGTATTAGAGAGCTGGAACTACATCGACGAAAACCCATGTTCATGGAATGGAGTTACCTGCGATGAAATCGAAAGCCCAGGTACTATGTTGAGAGTGACTTCCTTAATTCTTCCTAACAGCCAGCTTCTGGGTTCGATTTCTGAAGAACTAGGAAACATCCCATACCTTCGACGTATCGATTTGTCCTCAAATTTCCTCAATGGATCTTTACCCAGTTCCATTTTCAACTCTTCTGAGCTTCAGGTTCTCCACCTAGCCAACAATGTCATCTCCGGCGAGCTCCCTGAGTTGATCGGCCAACTCAAAAATCTTCAAGTTCTTAACCTGTCCGACAATGCTTTTGCTGGGTCAGTCCCAGAAAGTCTCACTGCTTTGAAAAATCTGACCTTTGTTTCTCTGAGAAGCAACTATTTTTCTGGTCAAGTTCCTAGTGGGTTCAACTCTCTGCAAGTTCTAGATCTGTCTTCGAATCTGCTTAATGATTCTTTACCAAATAACTTTGGCGGCGAACGATTAAGATACTTGAATCTATCTTACAATAAGATTTCAGGGATCATTCCTCCTAAATTTGCCACTCTGATTCCAGAAAACTCTATCATTGATCTTGCATTCAACAATCTGACCGGAGCAATACCAGAATCTCCGGTGCTTCTGAATCAGAAAATAGAGTACTATTCTGGCAATGGTGATGATCTTTGTGGGAAGCCTCTGAAAAATCTATGTTCTATTCCTTCTACTCTCTCAATTCCTCCATCCAACACAACAACAACCACCACATCTTCAACACCTGCTATTGCAGCCATACCAAAAACAATAGACACACACCCAGAAACAAACACAACAACAACAACAAACGGCTCATCGAATGGCTTAAAATCGACCACAATAGTAGCCATTGTCCTCGGAGATTTGACTGGTATAGCCATCATAGCCATGGTCATTTTCTTCGTCTATCATCAAAGAATCACAAGAGATCATGCCAAAGCTAAAGAAGAATACCCATGTTTTGTGAGAGTGAAACCTCTAAAGCTTCACTTTTCCTGCTTGAGAACCAAAGAAGACTCGACTTCATCAGAAGCAACCGGGTCTGACAGCGACCATGAGAGTACTAAATTTGACACGACAACCTCGAATCTTCCGAAAGAAACAGCTCTTGTTACACTAGATGCAGAGACAGAGCTGGATTTGGAGACTCTGCTTAAGGCTTCAGCGTTTATGTTGGGAACGACGAGGAGTGAGAGTATAGTGTACAGAGCAGTGCTTGAAGATGGAAGGGCTTTTGCAGTAAGAAGGATTGGAGAATGTGGGTTTGAGAAAAAGGATTTTGAGAATCATATGAAGATTATTGCTAAGATTCGCCATCCCAATTTGGTTTATGTTCGTGGGTTTTGTTGGGGAGAAGATGATAAGCTCGTGATCTGTGATTATGTTCCCAATGGCAGCCTTGCTAGTAGCTTCAGCCACAGAAGAGCAGGGTCTTCTTCTCCATTGAACTTGCCGTTGGAATTGAGGTTGAAGATAGCAGAAGGAATCGCACGAGGCTTAGCTTTCATTCACGAGAAGAAACATGTTCATGGCAACATCAAGCCCGGCAACATCTTATTAAGCTCAGAAATGGAACCTATAATAAGCGATCTTGGGCTCGACCGTCTGTGGCCTGCCAGTTCAAAGGTGAACCGGGGAAGCCAACCGGACCTCCCTCATATGGGTTCATCAAGTGGGACCAAACAAATGTTGACATATCAAGCACCAGAGTCTCTTCTTCAAAGCACTCAAGTCCAACCCAAGGCCGAGTGGGACGTGTACTCGTTTGGGATAGTGCTGCTGGAGCTTCTGAGTGGGAGGGTTTTCTCGGACCGGGAGTTAGACCGGTGGCTCAGAGAGGACGGGTCAGTGGAAGAGGAAAGAAACCGGGTTTTGAGGATGGTTGATGTGGGCATGAAGAGTGAGGTTGAAAGGAAGGAAGAAGCCATATTGGTGTGCTTCAAGTTAGGGTTTCGTTGTGCCTCTCTTAAGCCTAAAAAAAGACCGTCCATGAAAGAGGCTTTACAAATCTTAGAGAAAATCCCTAATTAA 2220 0.4383 MNLYSKNPHCFWGKASFFFLLLLPSSALNTDGISLLSFKYSILSDPSSVLESWNYIDENPCSWNGVTCDEIESPGTMLRVTSLILPNSQLLGSISEELGNIPYLRRIDLSSNFLNGSLPSSIFNSSELQVLHLANNVISGELPELIGQLKNLQVLNLSDNAFAGSVPESLTALKNLTFVSLRSNYFSGQVPSGFNSLQVLDLSSNLLNDSLPNNFGGERLRYLNLSYNKISGIIPPKFATLIPENSIIDLAFNNLTGAIPESPVLLNQKIEYYSGNGDDLCGKPLKNLCSIPSTLSIPPSNTTTTTTSSTPAIAAIPKTIDTHPETNTTTTTNGSSNGLKSTTIVAIVLGDLTGIAIIAMVIFFVYHQRITRDHAKAKEEYPCFVRVKPLKLHFSCLRTKEDSTSSEATGSDSDHESTKFDTTTSNLPKETALVTLDAETELDLETLLKASAFMLGTTRSESIVYRAVLEDGRAFAVRRIGECGFEKKDFENHMKIIAKIRHPNLVYVRGFCWGEDDKLVICDYVPNGSLASSFSHRRAGSSSPLNLPLELRLKIAEGIARGLAFIHEKKHVHGNIKPGNILLSSEMEPIISDLGLDRLWPASSKVNRGSQPDLPHMGSSSGTKQMLTYQAPESLLQSTQVQPKAEWDVYSFGIVLLELLSGRVFSDRELDRWLREDGSVEEERNRVLRMVDVGMKSEVERKEEAILVCFKLGFRCASLKPKKRPSMKEALQILEKIPN 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0272 739 FunFam Leucine-rich repeat receptor-like protein kinase 197 291 - -
Lele48g0272 739 Pfam Leucine rich repeat 192 230 IPR001611 GO:0005515
Lele48g0272 739 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Lele48g0272 739 SUPERFAMILY L domain-like 32 276 - -
Lele48g0272 739 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 79 736 - -
Lele48g0272 739 MobiDBLite consensus disorder prediction 403 424 - -
Lele48g0272 739 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 196 - -
Lele48g0272 739 ProSiteProfiles Protein kinase domain profile. 449 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0272 739 SUPERFAMILY Protein kinase-like (PK-like) 462 735 IPR011009 -
Lele48g0272 739 Pfam Protein kinase domain 462 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0272 739 MobiDBLite consensus disorder prediction 403 419 - -
Lele48g0272 739 Gene3D Phosphorylase Kinase; domain 1 417 524 - -
Lele48g0272 739 Gene3D Transferase(Phosphotransferase) domain 1 525 739 - -
Lele48g0272 739 ProSiteProfiles Leucine-rich repeat profile. 219 240 IPR001611 GO:0005515
Lele48g0272 739 Pfam Leucine Rich repeats (2 copies) 127 165 IPR025875 -
Lele48g0272 739 Gene3D Ribonuclease Inhibitor 28 193 IPR032675 -
Lele48g0272 739 Gene3D Ribonuclease Inhibitor 194 291 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0272 Lele-ChrLele48 2571963 2574374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0272 27 737 Receptor kinase-like Gene Family AT2G15300 50.398 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele48g0272 Pkinase 2.8e-28 CL0016