Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0268 ATGGCTTTTCAAGATTCTTCCTTTCTCCTCGATTCTCTCTACTGTCATGAGGCCGAGCTCGACGACGAACAAGACGAACCAGAAACGGAGTTCTCAGATGAAACTGATCTCACAAGCAATAATGCTTCTCTGTTTCCTCTCCTTCTTTTGGAGCAAGATTTGTTCTGGGAAGACCAAGAACTCATATCTCTCTTCACCAAAGAACAGCAACATCAAGAAGCTTCTTTCTCCAATCTGGGTAATCTGGAATTTTTACACTCTTCTCTCTCCTTGGCTCGTCGTGAAGCTGTGGAGTGGATTCTTAAGGTGAAATCTCACCATGGCTTCTCTGCTCTTACTTCAACTCTGGCCATTAATTACTTGGATAGATTCATTTTAAGCTTCAAAATTGAAATAGAGAAGCCATGGATGATCCAACTTGTCGCGGTCACTTGCCTCTCTTTAGCTGCAAAGGTTGAAGAGACAGAACTCCCTCCTCTTCTAGACCTTCAAGTGGAGGATACGAAGTATGTGTTCGATGGCAAGACGATTCTGAGAATGGAGCTTCTGGTTCTGTCGACACTGAAATGGAAGATGCACCCAGTGACACCATTGTCGTTCTTAGATCATATCATTCGAAGGCTTGGATTGAAAACCCATCTTCACTGGCAATTTCTCGAGCGTTGTGAGCATCTGCTTCTATCCGCACTCTCAGATTCAAGATTCGTGGGATGTCTTCCTTCTGTGTTGGCCACAGCCACAATGCTTCGTGTTATAGAGCAGATACAGCACAATGATGCGGCCGAATACCAAAAACAACTACTGGGTGTGCTTAAAATCAACAAGGAGAAAGTCGAGGAGTGTTATAAAGCAATTCGGGAGGCGTCTGATAGTAATAATAAGGAGAATAAAAAGAAGAGAAAGTATGATGAAAGAATAATAATGGATGGTGGATTTGGGGCTGACGAAGGATCCAACGGTTGGTGGAGAGTGGGGTCGTCTTCATCATTGTCTTGTGCATCACCACCAGAGTCTCTCTTCAAGAGGAACAGAACTCAGCAGCAGCAGCAACAACGTAGCAGTAATATGAAGTTGTCTGCACTGAATCGGGTTGGTGTTGCAATTGTTGTTTCATCTCCTTGA 1122 0.4394 MAFQDSSFLLDSLYCHEAELDDEQDEPETEFSDETDLTSNNASLFPLLLLEQDLFWEDQELISLFTKEQQHQEASFSNLGNLEFLHSSLSLARREAVEWILKVKSHHGFSALTSTLAINYLDRFILSFKIEIEKPWMIQLVAVTCLSLAAKVEETELPPLLDLQVEDTKYVFDGKTILRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLERCEHLLLSALSDSRFVGCLPSVLATATMLRVIEQIQHNDAAEYQKQLLGVLKINKEKVEECYKAIREASDSNNKENKKKRKYDERIIMDGGFGADEGSNGWWRVGSSSSLSCASPPESLFKRNRTQQQQQQRSSNMKLSALNRVGVAIVVSSP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0268 373 SMART Cyclin_C_2 195 319 IPR004367 -
Lele48g0268 373 Gene3D - 194 285 - -
Lele48g0268 373 PANTHER CYCLINS 55 294 IPR039361 -
Lele48g0268 373 Pfam Cyclin, C-terminal domain 195 304 IPR004367 -
Lele48g0268 373 CDD CYCLIN 93 185 IPR013763 -
Lele48g0268 373 Pfam Cyclin, N-terminal domain 91 192 IPR006671 -
Lele48g0268 373 SMART cyclin_7 98 186 IPR013763 -
Lele48g0268 373 Coils Coil 285 305 - -
Lele48g0268 373 SUPERFAMILY Cyclin-like 196 303 IPR036915 -
Lele48g0268 373 FunFam D6-type cyclin 77 193 - -
Lele48g0268 373 MobiDBLite consensus disorder prediction 333 357 - -
Lele48g0268 373 FunFam CYCLIN D32 194 283 - -
Lele48g0268 373 Gene3D - 91 193 - -
Lele48g0268 373 SUPERFAMILY Cyclin-like 58 193 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0268 Lele-ChrLele48 2546239 2547636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0268 4 285 Core Cell Cycle Gene Families AT4G34160 57.447 3.36e-108 320