Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0266 ATGAACAAGGGAAGCAATGAAGAGAAAAAGGGAAAAAGAAGCAGCACCAATGCTAGGATTGGGGAAAGTTTGAGGCAGAGATTAATGGCTCTGGGAAGGGAGGTTTTGATGCTGAGATCAACGCTGGAGAGACAGTTAAAAGAGTCACCTTTTGATGTGCTTCCGGGATCATGTGTGACCCTGCAATGGGAATTTTGGGCTGCTGGTATTGCCCAATTCTATACTGATCCCTACCCAGCTCCGATACTTGCTCTCTCAGATCCACGGCATAGATTCCCAAGTCGATTTGACTCTGCTTCATTTCTCGCTTCTCAAGATTTCCGACTTGGTCAAATGGATTCAGTGACTGCTGATACAGCTAATTTACCTCCTACTAAAGATCCATCTACTTCACCTTCTGTTAAAGAAGGACAAACTACTCCCCCTGCCGTCTCTGGGCAAGAAAATGCTTCTCATGTGACATCACCTACGCAATCTTCCACTGGCATTTCATCATGGGCTAGAAATCTGAAAATTTCCCAGCCATTTTCTGGTTCTCATGATGATCCAGCAAGTGAAAACGCTGGGAAATCTACTTTTGCACGCTTCACTAATAGTTTAACAATGCGGTTGTCTCCAAAACCATCTTCATCAGATGACAACTCCAATGAAGCTGCTGCTCAATCTAATTTGATCGAAAGTTTTGCAAAGGGTCTGTTTGACTCTTCTAGAAATGCTGTGAAAGCTGTGCAGGTCAAGGCCCGACATGTTGTTTCTCAGAATAAACGTCGATACCAGGAGGGAGGATTTGATCTAGATATGACATATATCACGGAAAACATTATAGCTATGGGATTTCCTGCTGGTGACATGAGCTCTGGGTTCTTTGGTTATGTAGAAGGGATTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGAGACCCATCATAAGGGTAAATACAAAGTGTACAATCTTTGTTCTGAGCGGCTGTATGATGCATCATTATTTGAGGGGAAGGTGGCCAGTTTCCCATTTGATGACCATAATTGCCCACCAATGCAACTGGTTATATCATTTTGTCAAAGCTCTTACGCATGGTTGAAGCAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAAGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTGAAGTTCTTCCCAACTGCTGAGGAGTCCATTGACTACTACAACCAGAAAAGGTGTTTTGATGGAAAAGGACTTGTTCTGCCAAGTCAGATTAGATATGTCAAATATTTTGAACGTGTCTTGACTTACTTCAATGGCGAAAATCCTCCAGCCCGCAGATGCATGCTTAGGGGATTCCGACTTCACAGGTGTCCTTACTGGATCAGGCCTTCTATAACTGTATCAGATCATAGTGGTGTCTTGTTCTCAACTAAAAAGCATCCAAGAACCAAGGATCTTAATCCAGAAGATTTTTGGTTCAGTGCACCAAAGAAAGGAGTGATGGTCTTCGCATTGCCTGGGGATCCTGGTCTTACAGAGGTAGGCGGGGACTTCAAAATTCATTTTCATGATCGTCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACCGAAAACAGGAAAATATTGAACACTAGTGATCTTGATGGTTTTGACAAGAGAAAATTACCTTCACCTGGATTCCTGGTTGAGGTTGTGCTTGTGGATTATAATGGCAATGTCACGACATCCAAACCTGAAACTGTACCCAATAGCTCAGATGAGAGGTCAAGTAGTATTCCTACCCAAGTTGATGCAAGCATCACAACTCCAAAAGCTGAAAAAGGGTCAGAGAATCGCGATAAAGAGGATGATGTGTTTTCAGACGGCGAGTCAGAGGATTCTACTTCAAGAAGCAGGCAGGCAAAAGCAGCTTCTGTAGCAGCTACTAATCCTAATTCTACCGCTGGATCTGAGCCTAAAACTTCAAGTGAGATGACAAACTTAACGCATGGCACGGAACAAATTTCTTTAGGACCTGCTACTCCGATTCCTAGTGGTAGCAAGCCAAAAAGTGAAGATGCGAGAACAGTGTCCGGTGTGGAAGCTCCCAGTTCAGAAAGTGAATTTAAGGCAATGGCTGCAGATGCTTCTGTGTTTACGTTTGGGGATGATGAAGACTATGAAAGTGAGTGA 2172 0.4286 MNKGSNEEKKGKRSSTNARIGESLRQRLMALGREVLMLRSTLERQLKESPFDVLPGSCVTLQWEFWAAGIAQFYTDPYPAPILALSDPRHRFPSRFDSASFLASQDFRLGQMDSVTADTANLPPTKDPSTSPSVKEGQTTPPAVSGQENASHVTSPTQSSTGISSWARNLKISQPFSGSHDDPASENAGKSTFARFTNSLTMRLSPKPSSSDDNSNEAAAQSNLIESFAKGLFDSSRNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGIYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPMQLVISFCQSSYAWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCFDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLNPEDFWFSAPKKGVMVFALPGDPGLTEVGGDFKIHFHDRQGDFYCWLNTTMTENRKILNTSDLDGFDKRKLPSPGFLVEVVLVDYNGNVTTSKPETVPNSSDERSSSIPTQVDASITTPKAEKGSENRDKEDDVFSDGESEDSTSRSRQAKAASVAATNPNSTAGSEPKTSSEMTNLTHGTEQISLGPATPIPSGSKPKSEDARTVSGVEAPSSESEFKAMAADASVFTFGDDEDYESE 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0266 723 CDD PTP_PTEN 266 430 IPR045101 GO:0016791
Lele48g0266 723 ProSiteProfiles C2 tensin-type domain profile. 442 569 IPR014020 -
Lele48g0266 723 MobiDBLite consensus disorder prediction 117 163 - -
Lele48g0266 723 SMART PTEN_C2_2 440 568 IPR014020 -
Lele48g0266 723 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 241 438 - -
Lele48g0266 723 ProSitePatterns Tyrosine specific protein phosphatases active site. 372 382 IPR016130 GO:0016311|GO:0016791
Lele48g0266 723 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 234 672 - -
Lele48g0266 723 MobiDBLite consensus disorder prediction 573 702 - -
Lele48g0266 723 MobiDBLite consensus disorder prediction 606 630 - -
Lele48g0266 723 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 269 437 IPR029021 -
Lele48g0266 723 MobiDBLite consensus disorder prediction 199 218 - -
Lele48g0266 723 Gene3D Protein tyrosine phosphatase superfamily 241 438 IPR029021 -
Lele48g0266 723 ProSiteProfiles Phosphatase tensin-type domain profile. 256 435 IPR029023 -
Lele48g0266 723 MobiDBLite consensus disorder prediction 573 605 - -
Lele48g0266 723 MobiDBLite consensus disorder prediction 631 674 - -
Lele48g0266 723 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 370 409 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0266 Lele-ChrLele48 2528529 2535247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0266 143 723 Protein tyrosine phosphatase (PTP) family AT3G19420 66.723 0.0 813