Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0263 ATGGATACCATCAATTTATGTGTTCTTTCATTCTTATTATCTTCTTCCTTGTTCCACTCATCAGTCTCAGCTTTCTCTCCTTATTATCACCACTCTCCTCCCACCTACTACTACCACTACCACTACCTCCCGCCACCGCCGCCACTGTCCCGGCTAGAGAAAGCACGGCGGGTGCTTCTGAAATTCGCCACCACAATCGACGATTCCAATTCCTTTACCAGAAACTGGCATGGCCCCAACCCTTGCGAGTTCAGAGGAGTTAAATGTGCAACTTACCCAAATTCAACTGAGAAAGCCGTTTCAGGATTAAATTTCAACCAAGCTGGTTTCTCTGCTCGTCAAGGTTCAAATTTGGGTCTCGCTGGAATCCTGGACTCCATTCCAGAATTAACATTCTTCCATGTCAACTCCAACAACTTCTCAGGACAAGTCCCCACTCAAATCCTTAGATTCCCATTTTTCTTCGAGCTCGACTTAAGCAACAACAAGCTCCAAGGTGAATTCCCAAGGGAAGTTCTTTCTTCTAAGCAACTTGTTTTCGTAGATCTCAGGTATAATAACCTCACCGGATCAGTCCCTCAAGAACTCTTCAAAATGGATCTCGACGTCATCTTCATCAACAACAACAAATTCAGCAGCCACCTTCCATGGAATTTCGGGCACACACCTGCGCGATACCTCACATTCGCCAACAACAAGTTCACCGGACCGATCCCAAGAAGCATAGGAAATGCTTCAAAGACGTTGACGGAAGTTCTGCTCTTGGGGAACCAGTTTTCTGGGTGTTTACCTTACGAGATTGGGTTCTTGAAGAAGGCCGTAGTCTTTGATGTGAGCAAGAACTCGTTGACGGGTCCAATCCCAGAATCTTTCGCTTGTTTAGAGAAGATTCGGTTCTTGAATTTAGCTCACAACAAATTCTATGGACCTGTTCCGGAATCAGTGTGCGAGCTTCATGGGATTTGCAACGATGGGAATCTTACCTTAACGGATAACTACTTCACTTACGTTGGACATAAATGCAGGAAGCTGATAAAATCGAAGGTTCTTGACGTGAGCCAGAATTGCATAGAGGGGCTTCCCAATCAGAAATCGCCAGAAGAATGTTACAAGTTTTTGTATTATGTGAAGCCATGTCCAAATGAAAAGTCTCTGAAGGAAGAAGGTTTGATTCGCTGTGGCCAACTCTTGGGAGGCATCCCATGCTGGGGTAAAGAGGGAGTTAGATGGGACAAGTTCCCAGATTCAGACGAGCTCGCCGTTTCAGGATTAGATTTCAACCAAGCTGGTTTCTCTCCTCGTCAAGGTTCTTCATGCTTGGATCTCACTGTAATCCTCGGAATCCCACAACTAACATTCTTCCATGTCAACTCCAACAACTTCTCAGGATCAGTCCCCAAAGAAATCATCCGATACCCATTTTTCTACGAGCTCGATTTAAGCAACAAGAAGCTCCAAGGTTATTTCCCATGTCAAGTTCTTTTTGCCCAACAACTCATTTTCTTAGATCTCAGGTTCAATATCCTCAACGGACCAATCCCTTCATTGCTCTTCTTTCTGGATCTCGACGTCATCTTCATCAACAACAACTTCTTCGGCTACCTTCCATGGATTTTCGGAGCCACACCTGCGAGATACCTCACATTCGCCAACAACAAGTTCATCGGACCAATCCCGAGAAGCATAGGACTAGCATCAAAGACATTGACGGAAGTTCTGTTCTTGGGAAACCAGTTTTCTGGGTGCTTACATTTTGAAATAGGGTTCCTGAAAAACGCAGTAGTCCTAGATGTGAGCAAGAACTCTTTAACGGGTCCAGTCCCAGAATCTTTTGCTTGCTTAGAGAAGATTCGTTTCTTGAATTTAGCTAACAACAAATTCTACGCTGCTGTTCCGGAGTCAGTGTGCGAGCTTCCTGGGATTCGTAACAATGGGAATTTTTCCTTGGCGGGTAACTATTCCACTGAAGTTGGACCTGAATGCAAGAAACTGATAAAATCGAAGGTCCTTGATGTAAGCCATAATTGCATAAAGGGGCTTCCCAATCAGAAATCGGCTGAAGAATGTGAAAAGATTTTGTCTCGAGTGAAGCCATGTCCGCATGCAAGGTCTCACTTTTGTTCCATGTAA 2130 0.4465 MDTINLCVLSFLLSSSLFHSSVSAFSPYYHHSPPTYYYHYHYLPPPPPLSRLEKARRVLLKFATTIDDSNSFTRNWHGPNPCEFRGVKCATYPNSTEKAVSGLNFNQAGFSARQGSNLGLAGILDSIPELTFFHVNSNNFSGQVPTQILRFPFFFELDLSNNKLQGEFPREVLSSKQLVFVDLRYNNLTGSVPQELFKMDLDVIFINNNKFSSHLPWNFGHTPARYLTFANNKFTGPIPRSIGNASKTLTEVLLLGNQFSGCLPYEIGFLKKAVVFDVSKNSLTGPIPESFACLEKIRFLNLAHNKFYGPVPESVCELHGICNDGNLTLTDNYFTYVGHKCRKLIKSKVLDVSQNCIEGLPNQKSPEECYKFLYYVKPCPNEKSLKEEGLIRCGQLLGGIPCWGKEGVRWDKFPDSDELAVSGLDFNQAGFSPRQGSSCLDLTVILGIPQLTFFHVNSNNFSGSVPKEIIRYPFFYELDLSNKKLQGYFPCQVLFAQQLIFLDLRFNILNGPIPSLLFFLDLDVIFINNNFFGYLPWIFGATPARYLTFANNKFIGPIPRSIGLASKTLTEVLFLGNQFSGCLHFEIGFLKNAVVLDVSKNSLTGPVPESFACLEKIRFLNLANNKFYAAVPESVCELPGIRNNGNFSLAGNYSTEVGPECKKLIKSKVLDVSHNCIKGLPNQKSAEECEKILSRVKPCPHARSHFCSM 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0263 709 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 119 335 - -
Lele48g0263 709 Gene3D Ribonuclease Inhibitor 398 535 IPR032675 -
Lele48g0263 709 Gene3D Ribonuclease Inhibitor 52 223 IPR032675 -
Lele48g0263 709 Pfam Leucine rich repeat N-terminal domain 55 89 IPR013210 -
Lele48g0263 709 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 379 - -
Lele48g0263 709 SUPERFAMILY L domain-like 445 678 - -
Lele48g0263 709 SUPERFAMILY L domain-like 55 358 - -
Lele48g0263 709 Gene3D Ribonuclease Inhibitor 536 695 IPR032675 -
Lele48g0263 709 Gene3D Ribonuclease Inhibitor 224 376 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0263 Lele-ChrLele48 2509058 2514061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0263 419 699 Leucine-rich Repeat extension Gene Families AT3G22800 38.516 6.86e-49 177